CX675693

Overview
NameCX675693
Unique NameCX675693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDI2_ARATH (Protein disulfide-isomerase 2 OS=Arabidopsis thaliana GN=At1g77510 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12
Identity = 39/122 (31.97%), Postives = 62/122 (50.82%), Query Frame = 2
Query:  119 NNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEV--ELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAPIPLE 478
            +NF     ++  +VV FYAPWC  C++L P +EKAA  +     P     + LAK+D +EE   E    + IQ +P+++I R G     D        Y G R+ +G+V  +++   P  +E
Sbjct:   37 SNFTETISKHDFIVVEFYAPWCGHCQKLAPEYEKAASELSSHNPP-----LALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQD--------YNGPREAEGIVTYLKKQSGPASVE 145          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11
Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 2
Query:  122 NFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            NFD     +  L+V FYAPWC  CK L P + KAA  ++          I LAKVD TEE +L +++ ++ YP+I+ F+ G            + Y   R+ D +V  +++   P
Sbjct:   35 NFDEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-----GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTA-------SPKEYTAGREADDIVNWLKKRTGP 137          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: TXND5_MOUSE (Thioredoxin domain-containing protein 5 OS=Mus musculus GN=Txndc5 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11
Identity = 33/113 (29.20%), Postives = 59/113 (52.21%), Query Frame = 2
Query:   74 EADDDSVEGSHMVTANNFDSYSH--EYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHES 406
            EAD    +  H       D ++H  +     V F+APWC  C+RL+P+W      + ++Y+   D ++ +AKVDCT + ++C    ++ YP+++ F+ G +     G  D E+
Sbjct:   37 EADSGVEQDPHAKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWND----LGDKYNSMEDAKVYVAKVDCTADSDVCSAQGVRGYPTLKFFKPGQEAVKYQGPRDFET 145          

HSP 2 Score: 69.707 bits (169), Expect = 2.278e-11
Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 2
Query:   95 EGSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHES 406
            +G + ++ANNF+ +  +    +  F+APWC  CK L P+WE+ A  +      E    + + KVDCT+   +C  H ++ YP++  FR G  V    G  D ES
Sbjct:  175 QGLYELSANNFELHVSQGNHFI-KFFAPWCGHCKALAPTWEQLALGL------EHSETVKIGKVDCTQHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLES 271          

HSP 3 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 2
Query:  152 ILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGR--ILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYY 412
            I  V FYAPWC  CK L P+WE+ +K        E  G   + +A+VDCT E  +C ++ ++ YP++ +FR G  V + +G  D +S +
Sbjct:  325 ITFVKFYAPWCGHCKNLAPTWEELSKK-------EFPGLSDVTIAEVDCTAERNVCSKYSVRGYPTLLLFRGGEKVGEHNGGRDLDSLH 406          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA1_PONAB (Protein disulfide-isomerase OS=Pongo abelii GN=P4HB PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  137 SHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +H+Y  L+V FYAPWC  CK L P + KAA  ++          I LAKVD TEE +L +++ ++ YP+I+ FR G            + Y   R+ D +V  +++   P
Sbjct:   40 AHKY--LLVEFYAPWCGHCKALAPEYAKAAGKLKAE-----GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTA-------SPKEYTAGREADDIVNWLKKRTGP 135          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  137 SHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +H+Y  L+V FYAPWC  CK L P + KAA  ++          I LAKVD TEE +L +++ ++ YP+I+ FR G            + Y   R+ D +V  +++   P
Sbjct:   42 AHKY--LLVEFYAPWCGHCKALAPEYAKAAGKLKAE-----GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTA-------SPKEYTAGREADDIVNWLKKRTGP 137          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  137 SHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +H+Y  L+V FYAPWC  CK L P + KAA  ++          I LAKVD TEE +L +++ ++ YP+I+ FR G            + Y   R+ D +V  +++   P
Sbjct:   40 AHKY--LLVEFYAPWCGHCKALAPEYAKAAGKLKAE-----GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTA-------SPKEYTAGREADDIVNWLKKRTGP 135          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 2
Query:  107 MVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGS-DVRDDHGHHDHESYYGDRDTDG-----LVKAMEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCR 565
            ++T  NF+         +V FYAPWC  CK+L P +EK   + ++         +L+AKVDC E   +C ++ +  YP+I+ F KGS + +   G    ES     +T+G     +  A   +V   P E  +++ LDG      E     AP  G C+
Sbjct:   33 VLTEENFEKEVGHDKGALVEFYAPWCGHCKKLAPEYEKLPNSFKKAKS------VLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKFEGPRTAESLAEFVNTEGGTNVKIATAPSHVVVLTP-ETFNEVVLDGTKDVLVEFY---APWCGHCK 181          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: ERP44_BOVIN (Endoplasmic reticulum resident protein ERp44 OS=Bos taurus GN=ERP44 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 39/139 (28.06%), Postives = 70/139 (50.36%), Query Frame = 2
Query:  122 NFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAPIPLEESHKLALDGKHKTTAENVKR 538
            N D   +   + +VNFYA WC + + L P +E+A+  ++E Y      +++ A+VDC +  ++ +R+ I  YP++++FR G  ++          Y G R    L   + +  +  P++E H LA      TT +  KR
Sbjct:   38 NIDDILNNADVALVNFYADWCRFSQMLHPIFEEASNVIKEEYPNA--NQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMK--------REYRGQRSVKALADYIRQQKSD-PIQELHDLA----EITTPDRSKR 161          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 2
Query:  137 SHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +H Y  L+V FYAPWC  CK L P + KAA  ++          I LAKVD TEE +L +++ ++ YP+I+ F+ G            + Y   R+ D +V  +++   P
Sbjct:   42 AHNY--LLVEFYAPWCGHCKALAPEYAKAAAKLKAE-----GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTA-------SPKEYTAGREADDIVNWLKKRTGP 137          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 36/116 (31.03%), Postives = 58/116 (50.00%), Query Frame = 2
Query:  119 NNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +NF+     +  L+V FYAPWC  CK L P + K A  ++          I LAKVD TEE +L +++ ++ YP+I+ F+ G            + Y   R+ D +V  +++   P
Sbjct:   34 SNFEEALAAHKYLLVEFYAPWCGHCKALAPEYAKRAAKLKAE-----GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTA-------SPKEYTAGREADDIVNWLKKRTGP 137          
The following BLAST results are available for this feature:
BLAST of CX675693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDI2_ARATH5.996e-1231.97Protein disulfide-isomerase 2 OS=Arabidopsis thali... [more]
PDIA1_BOVIN1.023e-1133.04Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
TXND5_MOUSE1.744e-1129.20Thioredoxin domain-containing protein 5 OS=Mus mus... [more]
PDIA1_PONAB2.976e-1134.55Protein disulfide-isomerase OS=Pongo abelii GN=P4H... [more]
PDIA1_MACFU2.976e-1134.55Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_HUMAN2.976e-1134.55Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
PDIA6_MEDSA3.886e-1130.19Probable protein disulfide-isomerase A6 OS=Medicag... [more]
ERP44_BOVIN3.886e-1128.06Endoplasmic reticulum resident protein ERp44 OS=Bo... [more]
PDIA1_RAT6.629e-1133.64Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_MOUSE6.629e-1131.03Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_64B02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64B02-C4-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675693 ID=CX675693; Name=CX675693; organism=Citrus sinensis; type=EST; length=832bp
AGGACCTGATTTAAGACCCACTGGTTCTGAATTCCACTCAATGCCTGTTA
TAAATTCGCTTAAGCATGGAGAGGAAGCTGATGATGATTCTGTTGAAGGT
TCTCATATGGTAACTGCCAATAATTTTGATAGTTATTCACATGAGTATCC
TATTTTAGTTGTCAATTTTTACGCTCCATGGTGCTACTGGTGTAAACGCC
TGAAACCATCATGGGAGAAAGCAGCCAAAACAATGAGAGAAAGGTATGAT
CCGGAAATGGATGGACGTATTCTTTTGGCAAAAGTTGATTGCACTGAAGA
AGTCGAGTTATGTAGGAGGCATCATATACAAGCGTATCCATCTATTCGCA
TATTCCGCAAAGGAAGTGATGTTAGAGACGATCATGGACACCATGATCAT
GAATCCTATTATGGAGATAGAGATACAGATGGCCTGGTCAAGGCTATGGA
AGAATTAGTTGCACCTATTCCTCTGGAGGAGTCTCATAAGCTAGCTTTGG
ATGGTAAACATAAAACTACTGCTGAAAATGTTAAAAGACCAGCACCAAAG
GCAGGAGGATGCAGAATTGAAGGATATGTGCGTGTGAAGAAGGTTCCCGG
TAATCTTATCATCTCAGCTCGTTCCGGAGCCCATTCATTTGATACTTCTG
AAATGAATATGTCACATGTTATATCCCATCTCTCATTTGGTCGGAAACTG
TCCCCTAAGGTGATGAGTGATGTTCAGCGATTGATACCTTATCTTGGTGG
AAGCCACGACAGGCTGAATGGTCGGTCATTCATTAATCATCGGGAAGTAG
GCGCAAATGTTACTATAGAGCATTATCTTCAA
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