CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.606e-39 Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = -2 Query: 154 SSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGES-IFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE-DYRKMVQKQY 624 +SK S+ VD SVT+RL+ ELMSLMMS G+SAFP+ +S + W GTI G T YEGL +K+S+ FP +YP+ PP + F + +HPNVD GNICLDIL+DKWS+ Y+ +TILLS+QSLLGEPN SPLN+ AA L + +Y++++ ++Y Sbjct: 13 NSKNSSSAGMAVDGHSVTKRLRSELMSLMMSNTP-GISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRY 170
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35 Identity = 78/143 (54.55%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 154 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFT-WIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQKQY 576 VT+RLQ EL+ L+ S + +SAFP ++ T W+G I G K T Y GL +K+SL FP +YPF PP +KF + +HPNVD+ GNICLDIL++KWS+ Y+ TILLS+QSLLGEPN SPLN+ AA L + + E+YRK V Y Sbjct: 9 VTKRLQNELLQLLSSTTE-SISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACY 150
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 70/143 (48.95%), Postives = 87/143 (60.84%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 TT +RL ++ L GVS P ++I TW I G + T +E ++KLSL F +YP KPP VKF + FHPNV G+ICLDILQ++WS YD IL SIQSLL EPNP SP NS AA L N+ +Y K VQ+ Sbjct: 2 TTPSRRRLMRDFKKLQ-EDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L GVS P +I W I G +GT +E ++KL++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L GVS P +I W I G +GT +E ++KL++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L +GVS P +I W I G +GT +E ++KL + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L +GVS P +I W I G +GT +E ++KL + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L +GVS P +I W I G +GT +E ++KL + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L +GVS P +I W I G +GT +E ++KL + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 585 +T +RL ++ L +GVS P +I W I G +GT +E ++KL + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 2 STPARRRLMRDFKRLQ-EDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |