CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16 Identity = 47/117 (40.17%), Postives = 64/117 (54.70%), Query Frame = -2 Query: 172 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNK-EDYRK 519 G+ F E I +IEG GT YEG +K+ L D+P PP+ F T FHPNV + G IC++ L+ W + +LL+++ LL PNPES LN A LL + +DY K Sbjct: 33 GIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSK 149
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16 Identity = 51/149 (34.23%), Postives = 76/149 (51.01%), Query Frame = -2 Query: 160 LQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED-YRKMVQK 564 LQK+L L D + + ++IF W TI G T+YEG + + FP +YP PP V+F + +HPNV G +C+ IL ++W+ + +I+LSI S+L PN ESP N AA +K D ++K V + Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSR 157
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = -2 Query: 205 EGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 501 + ++ W I G T+YEG +K L FP DYP +PP++KF T +HPNVD+ G++C+ IL +++W + TI++S+ S+L +PN +SP N AA Sbjct: 31 DDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAA 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = -2 Query: 205 EGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 501 + ++ W I G T+YEG +K L FP DYP +PP++KF T +HPNVD+ G++C+ IL +++W + TI++S+ S+L +PN +SP N AA Sbjct: 31 DDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAA 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = -2 Query: 205 EGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 501 + ++ W I G T+YEG +K L FP DYP +PP++KF T +HPNVD+ G++C+ IL +++W + TI++S+ S+L +PN +SP N AA Sbjct: 31 DDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAA 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16 Identity = 47/120 (39.17%), Postives = 65/120 (54.17%), Query Frame = -2 Query: 157 SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--------KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQ 492 +I W + G T+YEG +K + FP +YP+ PP++ F + +HPN+ G +C+ IL WS A TILLS+ SLL EPNP+SP N AA + YRK V K+ Sbjct: 29 NITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAA------KSYRKYVYKE 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = -2 Query: 145 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDYRKMVQKQYFAG 582 T+ R+QK+L L + + FP E I + T+ +G Y+G ++ S + ++P +PP+VK +HPN+D GN+CL+IL++ W +++ +Q L EPN PLN AA + N+E++++ V+ G Sbjct: 23 TAAQLRVQKDLSELSLPS--TMKTHFPSAEDIMNFELTVRPDEG-FYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVKHSMAGG 166
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 42/104 (40.38%), Postives = 63/104 (60.58%), Query Frame = -2 Query: 160 GGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQ-YGNICLDILQDKWSSAYDCRTILLS-IQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQK 462 G +GT YEG +K+ + P YPFK P + F FHPN+D+ G +CLD++ W++ YD I S + LL PNP PLN AAA+ L+ E+Y++ +++ Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 42/104 (40.38%), Postives = 63/104 (60.58%), Query Frame = -2 Query: 160 GGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQ-YGNICLDILQDKWSSAYDCRTILLS-IQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQK 462 G +GT YEG +K+ + P YPFK P + F FHPN+D+ G +CLD++ W++ YD I S + LL PNP PLN AAA+ L+ E+Y++ +++ Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 42/104 (40.38%), Postives = 63/104 (60.58%), Query Frame = -2 Query: 160 GGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQ-YGNICLDILQDKWSSAYDCRTILLS-IQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQK 462 G +GT YEG +K+ + P YPFK P + F FHPN+D+ G +CLD++ W++ YD I S + LL PNP PLN AAA+ L+ E+Y++ +++ Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKE 143 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |