CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = -2 Query: 157 WIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--------KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQ 480 W + G T+YEG +K + FP +YP+ PP++ F + +HPN+ G +C+ IL WS A TILLS+ SLL EPNP+SP N AA + YRK++ K+ Sbjct: 33 WDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAA------KSYRKLMHKE 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = -2 Query: 157 GESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDK--WSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQ 498 G + W I G T +EG YKL++ FP +YP +PP+ +F FHPNV G +CL IL ++ W A + ILL IQ LL +PN SP + A + +K +Y K V+ Q Sbjct: 35 GLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQ 151
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = -2 Query: 157 IEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQ 468 I G KGT +EG +KL + F DYP PP+ KFE FHPNV G +CL IL++ W A + ILL IQ LL EPN + P + A + ++ +Y K V+ Q Sbjct: 45 IPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQ 151
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = -2 Query: 157 SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDK--WSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 492 ++F W I G K T++EG Y++ + F D+P PP+ KFE FHPNV G +CL +L + W + + +L+ IQ LL PN E P + A + N+ +Y K V+K+ Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKE 151
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = -2 Query: 154 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLS-IQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 582 +S ++R + ++M LMMS D V +G F G K ++Y+G +K+ + P YP+K P V F T +HPNVD+ G++CLD++ WS +D + + + LL PNP PLN AAAL+ + K+Y Sbjct: 2 SSPSKRREMDMMKLMMS--DYKVETINDGMQEF--YVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEY 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = -2 Query: 160 LQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDYRKMVQK 564 LQK+L L D + + +++F W +I G T+YEG + + FP +YP PP V F + +HPNV G +C+ IL ++W+ + +I+LSI S+L PN ESP N AA +N+ ++RK V + Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSR 158
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = -2 Query: 145 YEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 444 Y+ + S YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 71 YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = -2 Query: 145 YEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 444 Y+ + S YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 71 YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = -2 Query: 145 YEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 444 Y+ + S YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 71 YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = -2 Query: 205 EGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD-------------KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 501 + ++ W I G T+YEG +K L FP DYP +PP++KF T +HPNVD+ G++C+ IL + +W + TI++S+ S+L +PN +SP N AA Sbjct: 31 DDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAA 142 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |