CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.140e-27 Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = -2 Query: 166 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMV 585 TT +RL + L +G+S P+ +I W I G + T ++G ++KL+LHF DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD +L SIQSLL +PNP+SP N+ AA L + NK +Y + V Sbjct: 2 TTPAKKRLMWDFKRLQKDP-PVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKV 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.036e-26 Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 585 +T +RL ++ L G+S P+ +I W I G T ++G ++KLSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + NK +Y + V++ Sbjct: 2 STPARKRLMRDFKRLQHDP-PAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.473e-26 Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 T+R+ KEL L + SA P GE +F W TI G + Y G + +++HFP DYPFKPP+V F T FHPN++ GNICLDIL+D+WS A +LLSI SLL +PNP+ PL Sbjct: 3 TRRILKELKELQRDP-PVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.536e-26 Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 585 +T +RL ++ L G+S P+ +I W I G T ++G ++KLSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + +K +Y + V++ Sbjct: 2 STPARKRLMRDFKRLQQDP-PAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVRE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.737e-26 Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = -2 Query: 163 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQ 585 +T +RL ++ L G+S P+ +I W I G T ++G ++KLSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + +K +Y + V+ Sbjct: 2 STPARKRLMRDFKRLQQDP-PAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVR 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.011e-25 Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 585 +T +RL ++ L G+S P +I W I G T ++G ++KL+L F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + NK +Y + V++ Sbjct: 2 STPARKRLMRDFKRLQQDP-PAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVRE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.011e-25 Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = -2 Query: 160 PNPTVENLRATAAASSKQ--PVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 666 P P + R +A K+ +SS T ++ +R+QKEL + + SA P+G++I+ W TI G G++YEG + L + F DYPFKPP+V F T +H N++ G ICLDIL+D WS A +LLSI SLL + NP PL S A L N+ ++ ++ ++ Sbjct: 30 PEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPP-NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.011e-25 Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = -2 Query: 160 PNPTVENLRATAAASSKQ--PVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 666 P P + R +A K+ +SS T ++ +R+QKEL + + SA P+G++I+ W TI G G++YEG + L + F DYPFKPP+V F T +H N++ G ICLDIL+D WS A +LLSI SLL + NP PL S A L N+ ++ ++ ++ Sbjct: 30 PEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPP-NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.011e-25 Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = -2 Query: 160 PNPTVENLRATAAASSKQ--PVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 666 P P + R +A K+ +SS T ++ +R+QKEL + + SA P+G++I+ W TI G G++YEG + L + F DYPFKPP+V F T +H N++ G ICLDIL+D WS A +LLSI SLL + NP PL S A L N+ ++ ++ ++ Sbjct: 30 PEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPP-NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25 Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = -2 Query: 163 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQ 585 +T +RL ++ L GVS P +I W I G T +E ++KL++ F +YP KPP V+F + FHPNV G ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA L N+ +Y K V+ Sbjct: 2 STPARRRLMRDFKRLQ-EDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVK 142 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |