CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25 Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +TS +RL ++ M + GVSA P +++ TW I G T +E +++L +HF YP KPP VKF + FHPNV G +CLDILQ++WS YD IL SIQSLL +PN SP N A+ L +N+++Y K V++ Sbjct: 2 STSARRRLMRDFKR-MQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25 Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +TS +RL ++ M + GVSA P +++ TW I G T +E +++L +HF YP KPP VKF + FHPNV G +CLDILQ++WS YD IL SIQSLL +PN SP N A+ L +N+++Y K V++ Sbjct: 2 STSARRRLMRDFKR-MQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25 Identity = 63/143 (44.06%), Postives = 86/143 (60.14%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +T+ +RL ++ L S G+S P +I W I G +++EG ++KLSL F +YP P VKF + FHPNV G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS +A L NK +Y + V++ Sbjct: 2 STAARRRLMRDFKRLQ-SDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = -2 Query: 163 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQ 570 +R+QKEL + + SA P+G++++ W+ TI G G++YEG + L +HF +YPFKPP+V F T +H N++ G ICLDIL+D WS A +LLSI SLL + NP PL S A L N+E++ ++ + Sbjct: 89 KRIQKELAEITLDPPP-NCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIAR 224
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = -2 Query: 160 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 570 +R+QKEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++E Y ++ ++ Sbjct: 4 KRIQKELTDLQRDP-PAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLARE 140
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 172 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 570 +R+QKEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP++ F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++KE Y + Sbjct: 4 KRIQKELSDLQRDP-PAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 172 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 570 +R+QKEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP++ F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++KE Y + Sbjct: 4 KRIQKELSDLQRDP-PAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 172 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 570 +R+QKEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP++ F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++KE Y + Sbjct: 4 KRIQKELSDLQRDP-PAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25 Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = -2 Query: 160 QRLQKELMSLMMSGGD--LGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 570 +R+QKEL L G D SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 4 KRIQKELQDL---GRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLARE 140
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25 Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = -2 Query: 220 QRLQKELMSLMMSGGD--LGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 570 +R+ KEL L G D SA P GE +F W TI G + Y G + L++HFP DYPFKPP+V F T +HPN++ G+ICLDIL+D+WS A +LLSI S+L +PNP+ PL Sbjct: 4 KRINKELTDL---GRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPL 119 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |