CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.251e-24 Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = -2 Query: 160 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 570 +R+ KEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 4 KRIHKELNDLARDP-PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.251e-24 Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = -2 Query: 160 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 570 +R+ KEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 4 KRIHKELNDLARDP-PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.245e-24 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +T +RL ++ M GVSA P +++ W I G T YE +++L L F +YP KPP VKF + FHPNV G ICLDILQ++W+ YD +IL SIQSL +PNP SP N AA L ++K Y K V++ Sbjct: 2 STPARRRLMRDFKR-MKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.245e-24 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +T +RL ++ M GVSA P +++ W I G T YE +++L L F +YP KPP VKF + FHPNV G ICLDILQ++W+ YD +IL SIQSL +PNP SP N AA L ++K Y K V++ Sbjct: 2 STPARRRLMRDFKR-MKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L SA P E +F W TI G + Y G + +S+HFP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRILKELKDLQKDP-PTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +T +RL ++ M GVSA P +++ W I G T YE +++L L F +YP KPP VKF + FHPNV G ICLDILQ++W+ YD +IL SIQSL +PNP SP N AA L ++K Y K V++ Sbjct: 2 STPARRRLMRDFKR-MKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L SA P E +F W TI G + Y G + +++HFP DYPFKPP+V F T FHPNV+ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRILKELKDLQKDP-PTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = -2 Query: 181 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 570 +R+ KEL L SA P GE +F W TI G + Y+G ++ L++ FP +YPFKPP+V+F T +HPNV+ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D Sbjct: 4 KRIHKELNDLAQDP-PAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRD 132
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = -2 Query: 181 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 570 +R+ KEL L SA P GE +F W TI G + Y+G ++ L++ FP +YPFKPP+V+F T +HPNV+ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D Sbjct: 4 KRIHKELNDLAQDP-PAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRD 132
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L SA P E +F W TI G + Y G + +++HFP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRILKELKDLQKDP-PTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |