CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L + SA P G+ +F W TI G + + G + +++HFP DYPFKPP+V F T +HPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRINKELRDLQRDP-PVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = -2 Query: 160 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 585 +T+ +RL ++ M + GVSA P +++ TW I G T +E +++L +HF YP KPP VKF + FHPNV G +CLDILQ++WS YD +L SIQSLL +PN S N A+ L +N+++Y K V++ Sbjct: 2 STAARRRLMRDFKR-MQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRE 143
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24 Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = -2 Query: 220 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 579 S ++R+ KEL L SA P G+ ++ W +I G + Y G + LS+HFP DYPFKPP++ F T +HPN++ GNICLDIL+D+WS A +LLSI SLL + NP+ PL Sbjct: 2 SSSKRIAKELSDLERDP-PTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPL 120
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24 Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = -2 Query: 163 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQ 585 +T+ +RL ++ M GVSA P +++ TW I G T +E ++++ L F YP KPP VKF + FHPNV G +CLDILQ++WS YD IL S+QSLL +PN SP N A+ L ++++ Y K V+ Sbjct: 2 STTARRRLMRDFKR-MQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVR 142
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24 Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L SA P E +F W TI G + Y G + +S+HFP DYPFKPP+V F+T +HPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRILKELKDLQKDPPS-NCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24 Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = -2 Query: 154 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 570 +R+ KEL L SA P G+ +F W TI G + Y+G + L++HFP DYPFKPP+V F T +HPN++ +ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 4 KRINKELSDLARDP-PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23 Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L SA P E +F W TI G + Y G + +++HFP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRILKELKDLQKDP-PTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23 Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = -2 Query: 220 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 573 ++R+ KEL L SA P E +F W TI G + Y G + +++HFP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 3 SKRILKELKDLQKDP-PTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23 Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = -2 Query: 160 NPTVENLRATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 663 N E +T + S N+ ++ +R+QKEL + + SA P+G++I+ W TI G G++YEG + L + F +YPFKPP+V F T +H N++ G ICLDIL+D WS A +LLSI SLL + NP PL S A + N+ ++ +M ++ Sbjct: 19 NQQTEKEGSTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPP-NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQ 186
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23 Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = -2 Query: 160 SKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 621 SK +S + + +TS +R+QKEL + + SA P+G++I+ W TI G G++YEG + L + F +YPFKPP+V F T +H N++ G ICLDIL+D WS A +LLSI SLL + NP PL S A + N+ ++ +M ++ Sbjct: 34 SKVSMSKNSKLLSTSA-KRIQKELADITLDPPP-NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQ 186 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |