CN188231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21 Identity = 55/133 (41.35%), Postives = 83/133 (62.41%), Query Frame = -2 Query: 184 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKE 579 S+ +R+ KE L+ S G++A P +++ + TIEG + + YE ++L L+ P DYP + P+V+F T +HPN+D+ G ICLD+L+ WS A RT+LLSIQ+LL PNP PL N A + N++ Sbjct: 3 SLPKRIIKETEKLV-SDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQ 134
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 184 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 519 G+ A P+ + + I G + + +EG ++KL L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL + A + E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNE 133
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = -2 Query: 220 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 519 G+ A P+ + + I G + + +EG ++KL L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = -2 Query: 220 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 519 G+ A P+ + + I G + + +EG ++KL L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = -2 Query: 220 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 519 G+ A P+ + + I G + + +EG ++KL L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = -2 Query: 220 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 519 G+ A P+ + + I G + + +EG ++KL L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = -2 Query: 220 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 519 G+ A P+ + + I G + + +EG ++KL L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 184 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 579 ++ +R+ KE+ +L G+ A P +++ + T+EG + + YEG + L L P +YP PP V+F T +HPNVD+ G ICL L+ WS A RT+LLSIQ+L+G PNP+ PL++ A + E Sbjct: 2 ALPKRIIKEIETLTRDPPP-GIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENE 132
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = -2 Query: 154 VRPNPTVENLRATAAASSKQPVSSPNTVDTTSVT---QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 672 +RP PT + ASS V TSV+ +R+Q+E+ L + SA P+G++++ WI TI G GT YEG + L + FP DYPFKPP++ F+T +H NVD G++ ++IL+D WS A +L +I+S+ +P P SP A L + V K++ Sbjct: 10 LRPLPTAMYAGYSGTASS--------WVAKTSVSASGKRIQREMAELNIDPPP-DCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEW 176
BLAST of CN188231 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.278e-20 Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = -2 Query: 220 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 579 ++ +R+ KE LM G+SA P ++ + I G + +EG + L L DYP P+V+F T +HPN+D+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 3 TLPKRIIKETQRLMTEPAP-GISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121 The following BLAST results are available for this feature:
BLAST of CN188231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188231 ID=CN188231; Name=CN188231; organism=Citrus sinensis; type=EST; length=736bpback to top |