CK939503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 46 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRK 456 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQK 198 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 453 EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAG----IAALAFLMP 785 E L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + I + ++MP Sbjct: 392 EQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMP 506
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 46 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRK 456 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQK 198 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 453 EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAG----IAALAFLMP 785 E L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + I + ++MP Sbjct: 392 EQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMP 506
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 46 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRK 456 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQK 198 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 453 EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAG----IAALAFLMP 785 E L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + I + ++MP Sbjct: 392 EQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMP 506
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: SDCS_STAA8 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 46 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRK 456 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQK 198 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 453 EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAG----IAALAFLMP 785 E L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + I + ++MP Sbjct: 392 EQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMP 506
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 46 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRK 456 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQK 198 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 453 EALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAG----IAALAFLMP 785 E L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G + + I + ++MP Sbjct: 392 EQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMP 506
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.836e-21 Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 468 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 788 LE P L ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG + ++F+LP TP N + F+TGH+ ++DM++TGL + + G+ L+ M T Sbjct: 457 LEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNT 563 HSP 2 Score: 97.0561 bits (240), Expect = 1.242e-19 Identity = 47/124 (37.90%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 49 LGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420 L V+ + +W TEA+P+ +T++ P+ LFP GI + V Y D L L I+A A+E N+H+R+AL + +L + P L+LG+ TT+F+SMW+ N A+ +M+P+A+ IL++L Sbjct: 42 LYVILLMAVYWCTEALPLSVTALLPIILFPFMGILPSSKVCPQYFLDTNFLFLSGLIMASAIEERNLHRRIALKVLMLV---GVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIASAILKSL 162
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21 Identity = 46/122 (37.70%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 55 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420 +L + +W+TEA+P+ IT++ P +FP+FGI S+ VA +Y D L++G LA ++E +N+HKR+AL + ++ +NP L LG +TAF+SMW+ N + A ++MP+ + Q + Sbjct: 40 ILFVIATFWITEALPLSITALLPGLMFPMFGIMSSTHVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMV---GVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQI 158 HSP 2 Score: 82.4185 bits (202), Expect = 3.145e-15 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 468 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 788 L + P I I LI +TE SN AT T++ P+L +A+ +HV+PL +++P + F+FLLP P N + F+ GH+++ DM+K GL + I G+A + M T Sbjct: 465 LGSLPVWLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFT 571
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.467e-20 Identity = 45/118 (38.14%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 67 VFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420 V +WLTEA+P+ +T++ P + P+FGI + VA +Y D L++G LA ++E +N+HKR+AL + ++ +NP L LG +TAF+SMW+ N + A ++MP+A ++Q + Sbjct: 44 VATFWLTEALPLSVTALLPSLMLPMFGIMPSKKVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALKMVMMV---GVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIAEAVVQQI 158 HSP 2 Score: 85.1149 bits (209), Expect = 4.852e-16 Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 402 WDLTELARGSSSI-NPC*EA---------LDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAL 770 WD+ L G ++ + C E+ L L + P I I L+ +TE SN AT TL LP+L +A+ +HV+PL +++P + F+FLLP P N + F+ GH+++ DM+K GL + I G+A + Sbjct: 433 WDIAILVGGGFALADGCEESGLSKWIGNKLSPLGSLPAWLIILISSLMVTSLTEVASNPATITLFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNIVGVAVV 565
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.503e-20 Identity = 45/122 (36.89%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 55 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420 +L + +W+TEA+P+ IT++ P +FP+FGI + VA +Y D L++G LA ++E +N+HKR+AL + ++ +NP L LG +TAF+SMW+ N + A ++MP+ + Q + Sbjct: 40 ILFVIAIFWITEALPLSITALLPGLMFPMFGIMRSSQVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMV---GVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQI 158 HSP 2 Score: 79.7221 bits (195), Expect = 2.039e-14 Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 468 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 788 L + P I I LI +TE SN AT T++ P+L +A+ + V+PL +++P + F+FLLP P N + F+ GH+++ DM+K GL + I G+A + M T Sbjct: 464 LGSLPVRLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIQVNPLQILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFT 570
BLAST of CK939503 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.241e-20 Identity = 43/107 (40.19%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 468 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 788 LE P ++ ++ A TEF SN AT + LP+L ++A + VHPL LM+PG +G F+F+LP TP N + F +GH+ ++DM++TGL + + G+ L+ M T Sbjct: 459 LENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNT 565 HSP 2 Score: 98.5969 bits (244), Expect = 4.269e-20 Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 49 LGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 420 L V+ + +W TEA+P+ +T++ P+ LFP GI ++ V Y D L L I+A A+E +N+H+R+AL I +L + P L+LG+ TT+F+SMW+ N A+ +M+P+A IL++L Sbjct: 42 LFVILLMAVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLV---GVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSL 162 The following BLAST results are available for this feature:
BLAST of CK939503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939503 ID=CK939503; Name=CK939503; organism=Citrus sinensis; type=EST; length=799bpback to top |