CK939497

Overview
NameCK939497
Unique NameCK939497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939497 vs. ExPASy Swiss-Prot
Match: PSBI_LEPTE (Photosystem II reaction center protein I OS=Leptosira terrestris GN=psbI PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 2 
Query:  182 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR 283
            MLTLK+FVYTVV FFVSLF+FGFLSNDPGRNP R
Sbjct:    1 MLTLKIFVYTVVTFFVSLFVFGFLSNDPGRNPSR 34
The following BLAST results are available for this feature:
BLAST of CK939497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PSBI_LEPTE8.510e-1188.24Photosystem II reaction center protein I OS=Leptos... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004749_H08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939497 ID=CK939497; Name=CK939497; organism=Citrus sinensis; type=EST; length=543bp
GGGAACCAAAATGTAGAATTCTAATTGTGTGAATTTAATTTATGAAAACG
ATTTTCTATTTAGAGAATCAAATTCTAAAAAGAACTTCATTTCTTGATGT
CAAAATTGGATATGTAGTATAAAAATAGAGAATCTATTCTCTTTTTCCTT
TTCCCCAAAAACCTGATTTGGAGATTGTGTAATGCTTACTCTCAAACTCT
TTGTTTACACCGTAGTGATATTCTTTGTTTCGCTCTTCATCTTCGGATTC
CTGTCTAATGATCCAGGGCGTAATCCCGGACGCGAAGAATAAAAAAGGAA
GGAGTTGCTTACTTTATTCGTATAAACGTTCTTAGGATTTTTGATTCCCA
GTTACTATTAAAAATAAAGTAAAAGTGTTCGCTAAAGTTAAATTTGAAAA
ATACCAAGCCATCGCCCGAAACGGAAAGAGAGGGATTCGAACCCTCGGTA
CGAAGAACTCGTACACCGGATTAGCAATCCGACGCTTTAATCCACTTAGC
CATCTCTCCTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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