CN188225

Overview
NameCN188225
Unique NameCN188225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN188225_ssr18 microsatellite CN188225_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..729. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOB_MOUSE (Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 1.772e-72
Identity = 147/209 (70.33%), Postives = 167/209 (79.90%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  + YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS FKEAM++G EVYHHLK VIK KYG+DA NVGD
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKARYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMRIGAEVYHHLKGVIKAKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOB_PIG (Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.314e-72
Identity = 147/209 (70.33%), Postives = 167/209 (79.90%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F+EAM++G EVYHHLK VIK KYG+DA NVGD
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMRIGAEVYHHLKGVIKGKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOB_BOVIN (Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.023e-72
Identity = 146/209 (69.86%), Postives = 166/209 (79.43%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGAS F+EAM++G EVYHHLK VIK KYG+DA NVGD
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPELILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMRIGAEVYHHLKGVIKAKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOA_MACFA (Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.948e-72
Identity = 147/216 (68.06%), Postives = 172/216 (79.63%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            ++I  V AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F+EAM++G EVYH+LK VIK+KYG+DA NVGD
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_EIMTE (Enolase OS=Eimeria tenella GN=ENO PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.156e-72
Identity = 139/216 (64.35%), Postives = 165/216 (76.39%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK--NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            + I  VKAR+I DSRGNPTVEVD+ T  G   RAAVPSGASTGIYEALELRDG    Y GKGV KAV NVN ++ PAL GKD  EQ A+D  MV++LDG+ NEWGW K  LGANAILAVS+A+C+AGA  K IPLYK++A+L+G++    VLPVP FNV+NGG HAGN LAMQEFM+ PVGA  F EA++MG EVY  L+ ++K K+G  A NVGD
Sbjct:    2 VAIVEVKAREILDSRGNPTVEVDLKTEQG-CFRAAVPSGASTGIYEALELRDGDKTRYNGKGVLKAVENVNKVLAPALVGKDCREQAALDRLMVEELDGSKNEWGWSKSVLGANAILAVSMALCRAGAAAKGIPLYKYVAQLAGHEAPEFVLPVPCFNVLNGGKHAGNSLAMQEFMVAPVGARSFGEALRMGAEVYQALQRLLKAKFGLAATNVGD 216          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.156e-72
Identity = 146/216 (67.59%), Postives = 172/216 (79.63%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F+EAM++G EVYH+LK VIK+KYG+DA NVGD
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOA_HUMAN (Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 5.156e-72
Identity = 146/216 (67.59%), Postives = 172/216 (79.63%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ F+EAM++G EVYH+LK VIK+KYG+DA NVGD
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOA_CHICK (Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.500e-71
Identity = 147/216 (68.06%), Postives = 170/216 (78.70%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     YLGKGVSKAV +VN  I PAL  K+    EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  FKEAM++G EVYH+LK VIK+KYG+DA NVGD
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADTFKEAMRIGAEVYHNLKNVIKEKYGKDATNVGD 209          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_DROME (Enolase OS=Drosophila melanogaster GN=Eno PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71
Identity = 147/216 (68.06%), Postives = 170/216 (78.70%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            +TI A+KARQI+DSRGNPTVEVD+TT  G + RAAVPSGASTG++EALELRD   ++Y GK V KAV +VN  +GP L  A  D  +Q +IDN+M++ LDGT N     K K GANAIL VSLAV KAGA  K +PLYKHIA+L+GNK ++LPVPAFNVINGGSHAGNKLAMQEFMILP GA+ F EAMKMG EVYHHLK VIK K+G DA  VGD
Sbjct:   68 MTIKAIKARQIYDSRGNPTVEVDLTTELG-LFRAAVPSGASTGVHEALELRDNDKANYHGKSVLKAVGHVNDTLGPELIKANLDVVDQASIDNFMIK-LDGTEN-----KSKFGANAILGVSLAVAKAGAAKKGVPLYKHIADLAGNKEIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTEAMKMGSEVYHHLKNVIKAKFGLDATAVGD 276          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENOG_RAT (Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71
Identity = 145/216 (67.13%), Postives = 170/216 (78.70%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            ++I  + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRDG    YLGKGV KAV ++N+ I PAL  +G    EQ  +DN M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F++AM++G EVYH LK VIK KYG+DA NVGD
Sbjct:    1 MSIQKIWAREILDSRGNPTVEVDLHTAKG-LFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSGLSVVEQEKLDNLMLE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGD 209          
The following BLAST results are available for this feature:
BLAST of CN188225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOB_MOUSE1.772e-7270.33Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3[more]
ENOB_PIG2.314e-7270.33Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1[more]
ENOB_BOVIN3.023e-7269.86Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1[more]
ENOA_MACFA3.948e-7268.06Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 ... [more]
ENO_EIMTE5.156e-7264.35Enolase OS=Eimeria tenella GN=ENO PE=2 SV=1[more]
ENOA_PONAB5.156e-7267.59Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1[more]
ENOA_HUMAN5.156e-7267.59Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2[more]
ENOA_CHICK1.500e-7168.06Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2[more]
ENO_DROME3.342e-7168.06Enolase OS=Drosophila melanogaster GN=Eno PE=1 SV=... [more]
ENOG_RAT3.342e-7167.13Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005L03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188225 ID=CN188225; Name=CN188225; organism=Citrus sinensis; type=EST; length=711bp
ATGCTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTG
TAGGAGCTTCCTGTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATAT
CACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCTANCAA
TGTTGGTGATG
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