CN188224

Overview
NameCN188224
Unique NameCN188224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_LEIXX (Enolase OS=Leifsonia xyli subsp. xyli GN=eno PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.909e-47
Identity = 89/143 (62.24%), Postives = 119/143 (83.22%), Query Frame = -2 
Query:  263 SDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 691
            ++YP+VSIEDP  +DDWE +A L +E+G  +Q+VGDDL VTNPKR+ + I++K  N++L+KVNQIG++TE+++AV +++++G   + SHRSGETEDT IADL+V   +GQIKTGAP RSER+AKYNQLLRIEEELG  AVYAG
Sbjct:  275 NNYPLVSIEDPLAEDDWEGWAHLNAEIGSTLQLVGDDLFVTNPKRLAQGIQQKAANSILVKVNQIGTLTETLDAVSLAQRSGMTAVLSHRSGETEDTTIADLAVATDSGQIKTGAPARSERVAKYNQLLRIEEELGEAAVYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_CLAMS (Enolase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=eno PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.909e-47
Identity = 88/144 (61.11%), Postives = 117/144 (81.25%), Query Frame = -2 
Query:  263 ISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 694
            ++ YP+++IEDP D+DDW  Y   T+E+G KVQIVGDDL VTNPKR+   I     N++L+KVNQIG++TE+++AV +++++G+  + SHRSGETEDT IADL+V +  GQIKTGAP RSER+AKYNQLLRIE++LGA AVYAG
Sbjct:  274 VASYPLITIEDPLDEDDWAGYDHFTAELGSKVQIVGDDLFVTNPKRLADGITRGVANSILVKVNQIGTLTETLDAVSLAQRSGYTTVLSHRSGETEDTTIADLAVAVEAGQIKTGAPARSERVAKYNQLLRIEQDLGAAAVYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_RHOE4 (Enolase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 91/144 (63.19%), Postives = 116/144 (80.56%), Query Frame = -2 
Query:  263 ISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 694
            I  YP+VSIEDP D+DDW+ +  LT ++G KVQ+VGDDL VTNP+R+E+ I +   NALL+KVNQIG++TE+++AV ++ + G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  274 IDAYPLVSIEDPLDEDDWDGWVALTDQIGNKVQLVGDDLFVTNPERLEEGIVKGAANALLVKVNQIGTLTETLDAVDLAHRNGYKTMMSHRSGETEDTTIADLAVAVGSGQIKTGAPARSERVAKYNQLLRIEENLGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MYCTU (Enolase OS=Mycobacterium tuberculosis GN=eno PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = -2 
Query:  263 YPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 685
            YP+VSIEDP  +DDW+ +A LT+ +G++VQIVGDD+ VTNP+R+E+ I+    NALL+KVNQIG++TE+++AV ++   G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  277 YPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MYCTF (Enolase OS=Mycobacterium tuberculosis (strain F11) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = -2 
Query:  263 YPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 685
            YP+VSIEDP  +DDW+ +A LT+ +G++VQIVGDD+ VTNP+R+E+ I+    NALL+KVNQIG++TE+++AV ++   G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  277 YPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MYCTA (Enolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = -2 
Query:  263 YPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 685
            YP+VSIEDP  +DDW+ +A LT+ +G++VQIVGDD+ VTNP+R+E+ I+    NALL+KVNQIG++TE+++AV ++   G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  277 YPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MYCBT (Enolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = -2 
Query:  263 YPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 685
            YP+VSIEDP  +DDW+ +A LT+ +G++VQIVGDD+ VTNP+R+E+ I+    NALL+KVNQIG++TE+++AV ++   G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  277 YPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MYCBP (Enolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = -2 
Query:  263 YPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 685
            YP+VSIEDP  +DDW+ +A LT+ +G++VQIVGDD+ VTNP+R+E+ I+    NALL+KVNQIG++TE+++AV ++   G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  277 YPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MYCBO (Enolase OS=Mycobacterium bovis GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = -2 
Query:  263 YPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 685
            YP+VSIEDP  +DDW+ +A LT+ +G++VQIVGDD+ VTNP+R+E+ I+    NALL+KVNQIG++TE+++AV ++   G+  M SHRSGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEE LG  A YAG
Sbjct:  277 YPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAG 417
[Close]
BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_ELUMP (Enolase OS=Elusimicrobium minutum (strain Pei191) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 87/147 (59.18%), Postives = 119/147 (80.95%), Query Frame = -2 
Query:  257 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 697
            ++  YPIVSIEDP  +DDW+ +  +T E+G+K+++VGDDL VTNP+R+E+ I++KT NA+L+K+NQIGSV+E+I+ + M+ +AG+  + SHRSGETED FIADL+V    G IKTGAPCRSER AKYN+LL+IE+ELG +A YA  K
Sbjct:  273 WVKKYPIVSIEDPLHEDDWDGWLHITKELGKKIRLVGDDLFVTNPERLEEGIEKKTANAILIKLNQIGSVSETIDVINMAHKAGYACVISHRSGETEDAFIADLAVATNAGAIKTGAPCRSERNAKYNRLLQIEQELGKKASYAKTK 419
The following BLAST results are available for this feature:
BLAST of CN188224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_LEIXX1.909e-4762.24Enolase OS=Leifsonia xyli subsp. xyli GN=eno PE=3 ... [more]
ENO_CLAMS1.909e-4761.11Enolase OS=Clavibacter michiganensis subsp. sepedo... [more]
ENO_RHOE42.493e-4763.19Enolase OS=Rhodococcus erythropolis (strain PR4 / ... [more]
ENO_MYCTU2.493e-4763.12Enolase OS=Mycobacterium tuberculosis GN=eno PE=3 ... [more]
ENO_MYCTF2.493e-4763.12Enolase OS=Mycobacterium tuberculosis (strain F11)... [more]
ENO_MYCTA2.493e-4763.12Enolase OS=Mycobacterium tuberculosis (strain ATCC... [more]
ENO_MYCBT2.493e-4763.12Enolase OS=Mycobacterium bovis (strain BCG / Tokyo... [more]
ENO_MYCBP2.493e-4763.12Enolase OS=Mycobacterium bovis (strain BCG / Paste... [more]
ENO_MYCBO2.493e-4763.12Enolase OS=Mycobacterium bovis GN=eno PE=3 SV=1[more]
ENO_ELUMP2.493e-4759.18Enolase OS=Elusimicrobium minutum (strain Pei191) ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005L03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188224 ID=CN188224; Name=CN188224; organism=Citrus sinensis; type=EST; length=698bp
TTTTTTTTTTTTTTTCCCGCAACTAGATACTCATTTTAATAAAACATGCT
CTAGGAAATGGTTCCTCATACAGCAAGGTTCAAGCTCTCAGACAAAAACT
GTGTCAAAATTATTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCC
ATAAAAATCCATTTTACATAACTTATTGAAGTACTCCATTGCTCAAATCC
AGCACCACACCAGATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGC
ACGGAACTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAA
TTCTCAGAAGCTGATTATACTTTGCAAGGCGCTCTGACCTGCATGGTGCT
CCTGTCTTAATTTGACCCGTGGCCAAGCCCACTGAGAGATCGGCAATGAA
AGTATCTTCAGTCTCACCACTGCGGTGGCTGGCCATCACACCCCACCCAG
CTTGCTTGGACATTCTGACGGCTTCAATGCTCTCAGTTACAGATCCAATT
TGATTAACCTTGAGAAGGAGGGCGTTGCAGGTCTTCTCTTTGATAGCCTT
CTCAACCCTCTTAGGATTGGTGACCAAAAGATCATCTCCAACAATTTGTA
CTTTTTCTCCGACCTCACTGGTTAGCTTGGCATAGTGCTCCCAGTCGTCT
TGGTCAAATGGATCTTCAATTGATACAATAGGATAATCAGAGATGAAT
back to top