EY666015

Overview
NameEY666015
Unique NameEY666015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY666015_ssr125 microsatellite EY666015_ssr125:125..142. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.879e-13
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 2
Query:  332 YVKEAPAKEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKL-DSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHD 682
            Y   A  K     +++   V   +  EL   TDNF +++ IG+G YG+VY G L SG   AIK+  + S Q ++EFL ++ ++SRL + N+V L+G+  +   ++L YE+   G+L D
Sbjct:  591 YSAVARRKRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRD 708          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.074e-13
Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = 2
Query:  353 KEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHGRK 700
            +E+  + V+P    + +  ELK  T +F  ++ +GEG +G VY G L  GR  A+K L   S+Q   +F+A++  +S + + N+V+L G   +G  R+L YE+   GSL   L G K
Sbjct:  670 EELLGMDVKPY---IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDK 783          

HSP 2 Score: 24.2534 bits (51), Expect = 4.074e-13
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  730 LSWAKELKLLLGPARGIGNLNEKA 801
            L W+   ++ LG ARG+  L+E+A
Sbjct:  787 LDWSTRYEICLGVARGLVYLHEEA 810          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.272e-13
Identity = 35/119 (29.41%), Postives = 70/119 (58.82%), Query Frame = 2
Query:  329 FYVKEAPAKEMKTVTVQPIAVPVISV--DELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSK-QPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSL 676
            +++  + ++E  ++ +     P++ V   ++ E TD+F   ++IG+G +G VY   L   +  A+KKL  +K Q ++EF+A++  + ++K+ N+V L+GY      ++L YE+   GSL
Sbjct:  880 YFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSL 998          

HSP 2 Score: 26.1794 bits (56), Expect = 5.272e-13
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  730 LSWAKELKLLLGPARGIGNLN 792
            L W+K LK+ +G ARG+  L+
Sbjct: 1012 LDWSKRLKIAVGAARGLAFLH 1032          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.941e-13
Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  395 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHGRK 700
            V+  + LK  TDNF   + +G G +G VY GV   G+  A+K+L  +S Q D EF  ++ ++++L++ N+V L+G+ ++G  R+L YE     SL + +   K
Sbjct:  348 VVDFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLK 450          

HSP 2 Score: 20.7866 bits (42), Expect = 6.941e-13
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  730 LSWAKELKLLLGPARGIGNLNE 795
            L W    K++ G ARG+  L+E
Sbjct:  455 LDWGVRYKMIGGVARGLLYLHE 476          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.037e-13
Identity = 40/130 (30.77%), Postives = 71/130 (54.62%), Query Frame = 2
Query:  302 NNPAGNPGGFYVKEAPAKEMKTVTVQPIAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 691
            ++P GN    + K    ++   V +   +V  + + +L + T+ F  +++I  G  G +Y G L  G    IK+L  S++ ++EF A++  +  +KN N+V L+GY V    R+L YE+ + G L+D LH
Sbjct:  262 DDPEGNR---WAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLH 388          

HSP 2 Score: 25.0238 bits (53), Expect = 9.037e-13
Identity = 9/26 (34.62%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  730 LSWAKELKLLLGPARGIGNLNEKAGP 807
            L W   LK+ +G A+G+  L+    P
Sbjct:  398 LDWPSRLKIAIGTAKGLAWLHHSCNP 423          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 56/202 (27.72%), Postives = 100/202 (49.50%), Query Frame = 2
Query:  257 EDDIRKASKNGPFVPNNPAGNPGGFYVKEAPAKEMKTVTVQPIAV----PVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRS-GRAAAIKKLD-SSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH----GRKVSKGRSQVQSCHGQKS*NCCWDQRGELEI*MKRLDPRIIRREIK 832
            +D  + +S +    P     N GG   ++  + ++K + +            +  EL E T NF ++  +GEG +G+V+ G +    +  AIK+LD +  Q  +EF+ +V  +S   + N+V+L+G+  +G  R+L YE+  +GSL D LH    G+K     ++++   G          RG LE    R+ P +I R++K
Sbjct:   40 DDQTQPSSDSTKVSPYRDVNNEGGVGKEDQLSLDVKGLNLNDQVTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGA--------ARG-LEYLHDRMTPPVIYRDLK 232          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.161e-12
Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 2
Query:  383 IAVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDS-SKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILHG 694
            + +   S+ ++K  T+NF + + IGEG +G VY G L  G   A+K+L + SKQ ++EFL ++ M+S L + N+V+L G  V+G   +L YE     SL   L G
Sbjct:  607 LMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFG 711          

HSP 2 Score: 23.8682 bits (50), Expect = 1.161e-12
Identity = 9/24 (37.50%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  730 LSWAKELKLLLGPARGIGNLNEKA 801
            L W    K+ +G ARG+  L+E++
Sbjct:  719 LDWPTRRKICIGVARGLAYLHEES 742          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  389 VPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSS---KQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 691
            V   S+ +L+     F  N L+GEG+ GRVY    + GR  A+K++DSS   K   +EF   VS +S + ++N+ ELVGY  +    +L YE+ + GSLH  LH
Sbjct:  400 VKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLH 503          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 2
Query:  341 EAPAKEMKTVTVQPI-AVPVISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKKLDSSKQPDQE----FLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 691
            EA  K   + +  P+ AV   +V  L++ T++F   +LIG G  G VY   L  G+  A++KLD  K P+ E    FL  V+ + R+++ N+V+LVG+  +   R+L +E+   G+LHD+LH
Sbjct:  446 EASLKRTTSKSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDK-KSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLH 566          
BLAST of EY666015 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  395 VISVDELKEKTDNFGTNSLIGEGSYGRVYFGVLRSGRAAAIKK---LDSSKQPDQEFLAQVSMVSRLKNENVVELVGYYVDGPLRVLAYEHASKGSLHDILH 691
            + S  EL++ TDNF  N ++G+G  G VY G+L  GR  A+K+   LD  K   +EF+ +V ++S++ + N+V+L+G  ++  + +L YEH   G L   LH
Sbjct:  408 IFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKV--EEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLH 507          
The following BLAST results are available for this feature:
BLAST of EY666015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
Y1684_ARATH1.879e-1335.59Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH4.074e-1335.04Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH5.272e-1329.41Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK28_ARATH6.941e-1334.95Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y5838_ARATH9.037e-1330.77Probably inactive leucine-rich repeat receptor-lik... [more]
RLCK7_ARATH9.325e-1327.72Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1534_ARATH1.161e-1238.10Probable LRR receptor-like serine/threonine-protei... [more]
SRF4_ARATH1.218e-1239.42Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
SRF1_ARATH1.218e-1236.07Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
WAKLI_ARATH1.591e-1237.25Wall-associated receptor kinase-like 22 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666015 ID=EY666015; Name=EY666015; organism=Citrus sinensis; type=EST; length=843bp
CCACGCGTCCGCAAGAAGGTATAGGGACAATTTCCTGCCAATTTGACAAA
TTTGCAAGGCATCTTCCTAATCTCTTTTCAATCAACTGAACTTTCTCTCT
AATTTCTCCAAGTCGAACCAACGCCTCTCTCTCTCTCTCTCTCCGTGAAT
CTGATCATCTTGTGCACTTCAGCCACCCCTTAAATCACGACCAAAATCGT
CCTCTTCATTGCGAGACTGAGGAGAAACTATCATGAGCTGCTTTGGTTGC
TGTGAAGAAGATGATATCCGTAAAGCTTCTAAAAACGGACCATTTGTGCC
AAATAACCCAGCCGGTAACCCTGGAGGTTTTTACGTGAAAGAAGCTCCAG
CAAAAGAAATGAAAACTGTAACTGTTCAACCTATAGCTGTCCCTGTCATT
TCAGTGGACGAGCTGAAGGAGAAAACGGATAATTTTGGTACAAATTCTTT
GATTGGTGAGGGTTCATATGGAAGAGTGTATTTTGGTGTTCTAAGAAGTG
GGCGTGCTGCAGCCATCAAGAAGCTCGATTCCAGTAAGCAACCGGACCAA
GAATTTCTAGCACAGGTCTCCATGGTATCAAGACTTAAGAATGAAAATGT
TGTCGAGCTTGTTGGTTATTATGTTGATGGACCTCTTCGTGTGCTTGCCT
ATGAGCATGCTTCTAAAGGATCTCTTCATGACATTCTCCATGGAAGAAAG
GTGTCAAAGGGGCGAAGCCAGGTCCAGTCTTGTCATGGGCAAAAGAGTTA
AAATTGCTGCTGGGACCAGCGAGGGGAATTGGAAATTTAAATGAAAAGGC
TGGACCCTCGTATCATCCGTCGCGAAATTAAAGAGCCAGAATG
back to top