CN188207

Overview
NameCN188207
Unique NameCN188207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33
Identity = 85/219 (38.81%), Postives = 111/219 (50.68%), Query Frame = 3
Query:   48 FCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWK-GRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            F  +   LIS A  AT    N C  T+W  A  + GG      G  L +     LDV +  K  R W RT C+ DSSG+  C T DC SG + C G G  PP +L E+ +      DF+D+SLVDGFN+P+  +P   + + C    C A++N  CP+ L   G       C + C  F   QYCCT   N   +C  T+YS+ FK +CP AYSY  DD
Sbjct:    9 FIFSALLLISTATAATFEILNQCSYTVWAAA--SPGG------GRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDC-SGGLQCTGWGQ-PPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSP---TSSNCHRILCTADINGQCPNVLRAPG------GCNNPCTVFQTNQYCCT---NGQGSCSDTEYSRFFKQRCPDAYSYPQDD 205          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 77/212 (36.32%), Postives = 107/212 (50.47%), Query Frame = 3
Query:   66 FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            + ++  H AT    N C  T+W  A  + GG +  ++G   +         P   + R W RT C+ D SG+  C T DC +G + C G G AP  +L EF +     QDF D+SLVDGFN+P+  +P  G    C    C A +N  CP++L  +G       C + C      +YCCT   N P +C PT  S+ FK++CP AYSY  DD
Sbjct:   18 YFVAVTHAATFDIVNKCTYTVWAAA--SPGGGRRLDSGQSWSINVN-----PGTVQARIWGRTNCNFDGSGRGNCETGDC-NGMLECQGYGKAPN-TLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNGG---CRNLRCTAPINEQCPAQLKTQGG------CNNPCTVIKTNEYCCT---NGPGSCGPTDLSRFFKERCPDAYSYPQDD 207          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.603e-33
Identity = 79/213 (37.09%), Postives = 109/213 (51.17%), Query Frame = 3
Query:   66 FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDV-PSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            + ++  H AT    N C  T+W  A +  GG QL+       S    +++V P   + R W RT C+ D SG+  C T DC +G + C G G  PP +L EF +     QDF D+SLVDGFN+P+  +P  G    C    C A +N  CP++L  +G       C + C      ++CCT   N P +C PT  S+ FK +CP AYSY  DD
Sbjct:   18 YFVAVTHAATFDIVNQCTYTVWAAA-SPGGGRQLN-------SGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDC-NGMLECQGYGK-PPNTLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNGG---CRNLRCTAPINEQCPAQLKTQGG------CNNPCTVIKTNEFCCT---NGPGSCGPTDLSRFFKARCPDAYSYPQDD 207          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32
Identity = 85/226 (37.61%), Postives = 106/226 (46.90%), Query Frame = 3
Query:   51 CLTFSFLISGAHLATITFTN---------NCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            CL F FL     LA +T+TN         NC  T+W  A    GG +L E G      A      P     R W RT C+ D +G+  C T DCG G + C G G  PP +L E+ +      DF+D+S++DGFN+P+S  P       C    C AN+N  CP  L V G       C + C  F   QYCCT        C PT  S+ FK +CP AYSY  DD
Sbjct:    7 CLVF-FL-----LAFVTYTNASGVFEVHNNCPYTVWAAATPIGGGRRL-ERGQSWWFWAP-----PGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPG------GCNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCPDAYSYPQDD 207          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 80/214 (37.38%), Postives = 102/214 (47.66%), Query Frame = 3
Query:   87 LATITFT---------NNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            LA +T+T         NNC  T+W  A    GG +L E G      A      P     R W RT C+ D +G+  C T DCG G + C G G  PP +L E+ +      DF+D+S++DGFN+P+S  P       C    C AN+N  CP  L V G       C + C  F   QYCCT        C PT+ S+ FK +CP AYSY  DD
Sbjct:   13 LAFVTYTYASGVFEVHNNCPYTVWAAATPVGGGRRL-ERGQSWWFWAP-----PGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG------GCNNPCTTFGGQQYCCTQG-----PCGPTELSRWFKQRCPDAYSYPQDD 207          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.597e-31
Identity = 81/218 (37.16%), Postives = 106/218 (48.62%), Query Frame = 3
Query:   54 LTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKG-RFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTS-SCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            L  +FL + A  AT    NNC  T+W  A+   GG +L      + +    T       KG R W RT C+ D +G+  C T DC +G + C   G  PP +L E+ +      DFFD+SLVDGFN+ +  +P  G    CT    C A++N  CP+EL   G       C + C  F   QYCC         C  T +SK FKD+CP AYSY  DD
Sbjct:   13 LFIAFLFTCARGATFNIINNCPFTVWAAAVPG-GGKRLDRGQNWIINPGAGT-------KGARVWPRTGCNFDGAGRGKCQTGDC-NGLLQCQAFGQ-PPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGG---CTRGIKCTADINGQCPNELRAPG------GCNNPCTVFKTDQYCCNSG-----NCGLTNFSKFFKDRCPDAYSYPKDD 206          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.597e-31
Identity = 78/218 (35.78%), Postives = 108/218 (49.54%), Query Frame = 3
Query:   48 FCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDV-PSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYD 698
            F   F  L++ +  AT    N C  T+W  A  + G A L   G +L S    T++V P    G+ WART C  D SG+  C T DCG G + C   G  PP +L EF++    G+D+ D+S + GFN+P+  +P   +   C    C A++   CP++L   G       C  AC  F   +YCCT        C PT+YS+ FK  CP A+SY  D
Sbjct:    9 FLFPFLLLLTLSRAATFEIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCG-GLLQCKRFG-RPPTTLAEFSL-NQYGKDYIDISNIKGFNVPMDFSP---TTRGCRGVRCAADIVGQCPAKLKAPGG-----GCNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCPDAFSYVLD 208          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 75/204 (36.76%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   90 ATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDV-PSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYD 698
            AT    N C  T+W  A  + G A L   G +L S    T++V P    G+ WART C  D SG   C T DCG G + C   G  PP +L EF++    G+D+ D+S + GFN+P++ +P   +   C    C A++   CP++L   G       C  AC  F   +YCCT        C PT+YS+ FK  CP A+SY  D
Sbjct:    1 ATFEIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCG-GLLRCKRFG-RPPTTLAEFSL-NQYGKDYIDISNIKGFNVPMNFSP---TTRGCRGVRCAADIVGQCPAKLKAPGG-----GCNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCPDAFSYVLD 186          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 3
Query:   30 MNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWK-GRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGN 548
            M+T A+  L  +   +GA  AT    NNC +TIWP  +   GG       FEL S    +++VP+  + GR WART CS +  G  +C T DCG GQ++C+ +G  PPA+L EFTI     QDF+D+S++DGFNL +  +   G    C   SC        P+++A     GN
Sbjct:    1 MSTSAVLFLLLAVFAAGASAATFNIKNNCGSTIWPAGIPVGGG-------FELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCG-GQLSCSLSGR-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSCPPPQAYQHPNDVATHACSGN 164          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 3
Query:   30 MNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWK-GRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGN 548
            M+T A+  L  +   +GA  AT    NNC +TIWP  +   GG       FEL S    +++VP+  + GR WART CS +  G  +C T DCG GQ++C+ +G  PPA+L EFTI     QDF+D+S++DGFNL +  +   G    C   SC        P+++A     GN
Sbjct:    1 MSTSAVLFLLLAVFAAGASAATFNIKNNCGSTIWPAGIPVGGG-------FELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCG-GQLSCSLSGQ-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSCPPPQAYQHPNDVATHACSGN 164          
The following BLAST results are available for this feature:
BLAST of CN188207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OSL3_ARATH1.211e-3338.81Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
PRR1_TOBAC1.582e-3336.32Pathogenesis-related protein R major form OS=Nicot... [more]
PRR2_TOBAC4.603e-3337.09Pathogenesis-related protein R minor form OS=Nicot... [more]
OS35_SOLCO2.284e-3237.61Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC5.089e-3237.38Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
TLP_ACTDE9.597e-3137.16Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
THM2_THADA9.597e-3135.78Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA3.087e-2936.76Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PR1C_HORVU3.195e-2638.51Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]
PR1A_HORVU3.195e-2638.51Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188207 ID=CN188207; Name=CN188207; organism=Citrus sinensis; type=EST; length=702bp
GACCATCAAGCAAAGCCTCAGCTTTCATGATGAATACCCGAGCAATATTT
TGCCTTACCTTCTCCTTCCTCATCTCTGGGGCGCACTTGGCAACGATTAC
GTTCACAAACAACTGCCAAAACACTATTTGGCCGGGAGCCCTAACCGCAG
ATGGAGGTGCTCAGCTGTCAGAAAATGGGTTCGAGTTAGCATCCAAAGCA
AAAAAGACTCTCGATGTTCCTTCCCCTTGGAAAGGCCGTTTCTGGGCTCG
AACACAGTGCTCTAGAGATTCCTCCGGCAAGTTCACTTGCGCCACTGCAG
ATTGTGGCTCAGGCCAAGTCACATGCAACGGTAATGGTGCAGCCCCACCG
GCATCTCTCGTGGAATTCACAATTGCTGCAGACAAAGGACAAGATTTCTT
CGATCTTAGCCTCGTTGATGGCTTTAACTTGCCTCTTTCAGTTGCCCCAC
AAGGCGGTTCTGGTGCTACTTGCACGACATCTAGCTGTAAAGCCAACGTG
AATGCTGTTTGTCCATCAGAGCTAGCAGTCAAAGGATCCGATGGGAATGT
TATTGCTTGCAAGAGTGCATGTGCAGCTTTTAATGAACCACAATATTGTT
GCACTGGGGCATTCAATAAACCTGAGACTTGCCCACCGACTAAATATTCT
AAGATTTTCAAAGACCAGTGCCCTCAAGCTTATAGCTATGCTTATGATGA
TC
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