CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.547e-41
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLH 658
            G  LLED+   +KL +FD ERIPERVVHARGA A G F    D SN+T A FL A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGNFD+VGNN PVFF++D ++FPD++H++KP+P + + +    +    DFFS  P +LH
Sbjct:   75 GSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALH 225          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.614e-40
Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 2
Query:  170 QQLINDDWT*SCFN-LTGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSF 670
            +Q   DDW     +   GP LLED    E++  FD ERIPERVVHARG+ A G F+V    S+LT A  L     +TPV VRFSTV+  RGS +T+RD RGFAVKFYT EGN+DLVGNN PVFF++D +KFPD++HA KP P + + +    +    DF  +H E+ HMF++
Sbjct:   48 KQTTADDWLRIVSDDKIGPSLLEDPFARERIMRFDHERIPERVVHARGSGAFGKFKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHNEVPQAQSAHNNFWDFQFNHTEATHMFTW 219          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.108e-40
Identity = 85/154 (55.19%), Postives = 103/154 (66.88%), Query Frame = 2
Query:  215 TGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMF 664
            TGP LLED    EK+  FD ERIPERVVHARG  A G F++   + +LT A  L      TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+D+VGNN PVFF++D +KFPD VHA+KP P + + +    +    DF   HPE+ HMF
Sbjct:   65 TGPSLLEDQIAREKIHRFDHERIPERVVHARGTGAFGNFKLKESIEDLTYAGVLTDTSRNTPVFVRFSTVQGSRGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAVKFPDFVHAVKPEPHNEVPQAQTAHNNFWDFVYLHPEATHMF 218          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.824e-40
Identity = 77/150 (51.33%), Postives = 109/150 (72.67%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFS 667
            GP+LL+D   +EKLA+FDRE IPER +HA+G++A G F VTHD++  T A      G +T + +RFSTV  ERG+ +  RD RGF+++FYT +GN+DLVGNN PVF++RD +KFPD+ H +K +P+++++      DFFSH PESLH  +
Sbjct:   28 GPMLLQDVWFLEKLAHFDREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLT 177          

HSP 2 Score: 25.7942 bits (55), Expect = 2.824e-40
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +GAPV +N +  T GPR
Sbjct:    8 TTAAGAPVVDNQNVQTAGPR 27          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.596e-40
Identity = 85/151 (56.29%), Postives = 104/151 (68.87%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFF----SHHPESLH 658
            GP LLED+ L EK+ +FD ERIPER+VHARG++A G+F+    +S++T ADFL  P   TPV VRFSTV    GS +T+RD RGFA KFYT EG FDLVGNN P+FF++D  KFPD VHA+KP P   I +     D F    S  PE+LH
Sbjct:  101 GPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLH 251          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.680e-40
Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQ---ENWRIVDFFSHHPESLH 658
            GPI+L+D  L+EKLA+FDRE IPER +HA+G+ A G F VTHD++  T A      G QT   VRFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD+ HA+K +P+++++    NW   DF++  PE+LH
Sbjct:   27 GPIMLQDPWLIEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTRAAIFSQVGKQTECFVRFSTVAGERGAADAERDIRGFAMKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRNNMRSANNNW---DFWTLLPEALH 173          

HSP 2 Score: 23.8682 bits (50), Expect = 3.680e-40
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            T  +G P+ +N +S T GPR
Sbjct:    7 TAANGRPIADNQNSQTAGPR 26          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.010e-40
Identity = 83/154 (53.90%), Postives = 103/154 (66.88%), Query Frame = 2
Query:  215 TGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMF 664
            +GP LLED+   E++  FD ERIPERVVHARG  A G F +   + +LT A  L      TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+D+VGNN PVFF++D +KFPD VHA+KP P + + +    +    DF   HPE+ HMF
Sbjct:   65 SGPSLLEDHIARERIHRFDHERIPERVVHARGTGAYGNFTLKESIEDLTYAGVLTDTSRNTPVFVRFSTVQGSRGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAIKFPDFVHAVKPEPHNEVPQAQTAHNNFWDFVYLHPEATHMF 218          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.046e-39
Identity = 81/151 (53.64%), Postives = 99/151 (65.56%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLH 658
            GP LLED+   +K+  FD ER+PER VHARG  A G F    D SN+T A FL A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF++D + FPD++HA+KP   + I +    +    DFFS  P SLH
Sbjct:   74 GPTLLEDFIFRQKIQRFDHERVPERAVHARGVGAHGVFTSYGDYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSSLH 224          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.785e-39
Identity = 80/151 (52.98%), Postives = 99/151 (65.56%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLH 658
            GP LLED+   +K+  FD ER+PER VHARGA A G F    D SN+T A FL   G QTPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF++D + FPD++HA+KP   + I +    +    DFFS  P ++H
Sbjct:   75 GPTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNEIPQAATAHDSAWDFFSQQPSTMH 225          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.785e-39
Identity = 80/152 (52.63%), Postives = 108/152 (71.05%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++DY L+EKLA+ +RERIPER VHA+G+ A G  ++T D+S  T A   +  G  TP+ +RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN P FF+RD  KFPD +H  K +P++H++ N    DF+S  PESLH  + L
Sbjct:   25 GPLLMQDYLLLEKLAHQNRERIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQK-GEITPLFLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWSLCPESLHQVTIL 175          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT3_NEUCR5.547e-4154.97Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CAT1_NEUCR1.614e-4051.16Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATA_ASPFU2.108e-4055.19Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATA_PSEAE2.824e-4051.33Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATE_ECOLI3.596e-4056.29Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_BACFR3.680e-4055.33Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_EMENI8.010e-4053.90Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATB_ASPOR1.046e-3953.64Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATB_ASPFU1.785e-3952.98Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATA_CAMJE1.785e-3952.63Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
back to top