CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BOTFU (Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.083e-36
Identity = 76/154 (49.35%), Postives = 100/154 (64.94%), Query Frame = 2 
Query:  212 LTGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            L   +LL+D +L+E + +   ERIPERVVHARG SA G+FEVT D+S++T A FL   G QT +  RFSTV     S ET+RD RGFA K +T EGN D +  + PVF +RDG KFP   HA K NP+S + ++    D+F+H+ E +H   FL
Sbjct:   34 LRATLLLQDINLLELIQHITHERIPERVVHARGTSAHGYFEVTDDISDVTSAAFLNRVGKQTDIFCRFSTVAGRAESAETVRDTRGFAFKMFTEEGNLDWLFLSTPVFPIRDGAKFPSFTHATKKNPRSGLPDHKAFWDYFTHNQEGIHFLMFL 187
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.017e-36
Identity = 77/152 (50.66%), Postives = 104/152 (68.42%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPI+L D HL+E   +F+R  IPER  HA+G+ A G FEVT DVS  T A  +  PG +T  ++RFSTV  E GSP+T RD RGFA++FYT EGN+DLVGNN P+FF+RD MKF   + + K  P S +++     DF++++PES H  ++L
Sbjct:   34 GPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEVTEDVSKYTKA-LVFQPGTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYL 184
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.193e-35
Identity = 73/155 (47.10%), Postives = 105/155 (67.74%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E++++FDRE IPER +HA+G+ A G F VT+D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDIYFLEQMSHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTSAKMFSEVGKQTEMFARFSTVSGERGAADAERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTIL 180

HSP 2 Score: 24.2534 bits (51), Expect = 9.193e-35
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            GAPV +  +SMT GPR
Sbjct:   13 GAPVSDRENSMTAGPR 28
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_YEAST (Peroxisomal catalase A OS=Saccharomyces cerevisiae GN=CTA1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.323e-34
Identity = 68/140 (48.57%), Postives = 98/140 (70.00%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFS 637
            GP+LL+DY+L++ LA+F+RE IP+R  HA G+ A G+FEVT D++++  +      G +T  + RFSTV  ++GS +T+RDPRGFA KFYT EGN D V NN PVFF+RD  KFP  +H  K NP++++++     DF +
Sbjct:   43 GPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSGAFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLT 182
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.846e-34
Identity = 73/155 (47.10%), Postives = 105/155 (67.74%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E++++FDRE IPER +HA+G+ A G F VT+D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDAYFLEQMSHFDREVIPERRMHAKGSGAFGTFTVTNDITKYTNAKIFSEVGKQTEMFARFSTVAGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDSKLFVSLNRAVKRDPRTNMRSPQNNW---DFWTGVPEALHQVTIL 180

HSP 2 Score: 21.9422 bits (45), Expect = 5.846e-34
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            G PV +  +SMT GPR
Sbjct:   13 GHPVSDRENSMTAGPR 28
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.614e-34
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E+++ FDRE IPER +HA+G+ A G F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTIL 180

HSP 2 Score: 21.9422 bits (45), Expect = 7.614e-34
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            G PV +  +SMT GPR
Sbjct:   13 GHPVSDRENSMTAGPR 28
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAAU (Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.614e-34
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E+++ FDRE IPER +HA+G+ A G F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTIL 180

HSP 2 Score: 21.9422 bits (45), Expect = 7.614e-34
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            G PV +  +SMT GPR
Sbjct:   13 GHPVSDRENSMTAGPR 28
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.614e-34
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E+++ FDRE IPER +HA+G+ A G F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTIL 180

HSP 2 Score: 21.9422 bits (45), Expect = 7.614e-34
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            G PV +  +SMT GPR
Sbjct:   13 GHPVSDRENSMTAGPR 28
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.614e-34
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E+++ FDRE IPER +HA+G+ A G F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTIL 180

HSP 2 Score: 21.9422 bits (45), Expect = 7.614e-34
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            G PV +  +SMT GPR
Sbjct:   13 GHPVSDRENSMTAGPR 28
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 7.614e-34
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D + +E+++ FDRE IPER +HA+G+ A G F VT D++  T A      G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L
Sbjct:   29 GPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTIL 180

HSP 2 Score: 21.9422 bits (45), Expect = 7.614e-34
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 
Query:  153 GAPVWNNNSSMTIGPR 200
            G PV +  +SMT GPR
Sbjct:   13 GHPVSDRENSMTAGPR 28
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_BOTFU1.083e-3649.35Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 ... [more]
CATA_MICLU7.017e-3650.66Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CATA_STAWA9.193e-3547.10Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]
CATA_YEAST1.323e-3448.57Peroxisomal catalase A OS=Saccharomyces cerevisiae... [more]
CATA_STAHJ5.846e-3447.10Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_STAAW7.614e-3447.74Catalase OS=Staphylococcus aureus (strain MW2) GN=... [more]
CATA_STAAU7.614e-3447.74Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=... [more]
CATA_STAAS7.614e-3447.74Catalase OS=Staphylococcus aureus (strain MSSA476)... [more]
CATA_STAAR7.614e-3447.74Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_STAAN7.614e-3447.74Catalase OS=Staphylococcus aureus (strain N315) GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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