CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11165 contig Csv1_Contig11165:96..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 2.971e-92
Identity = 139/152 (91.45%), Postives = 148/152 (97.37%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EKLA FDRERIPERVVHARGASAKGFFEVTHDVS LTCADFLRAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGNFDLVGNN PVFF+RDGMKFPDMVHA KP+PK+++QENWR+VDFFSHHPESLHMF+FL
Sbjct:   38 GPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRVVDFFSHHPESLHMFTFL 189

HSP 2 Score: 60.077 bits (144), Expect = 2.971e-92
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK RP S  N+ ++TTNSGAPVWNNN+++T+G R
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.056e-92
Identity = 142/152 (93.42%), Postives = 151/152 (99.34%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LLEDYHLVEKLANFDRER+PERVVHARGASAKGFFEVTHD+++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF+RDGMKFPDMVHALKPNPKSHIQENWR++DFFSH PESLHMF+FL
Sbjct:   31 GPVLLEDYHLVEKLANFDRERVPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRVLDFFSHVPESLHMFTFL 182

HSP 2 Score: 52.7582 bits (125), Expect = 5.056e-92
Identity = 22/30 (73.33%), Postives = 28/30 (93.33%), Query Frame = 3 
Query:  111 PASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            P+S+FN+PF TTNSGAPV+NNNSS+T+G R
Sbjct:    1 PSSAFNSPFCTTNSGAPVFNNNSSLTVGAR 30
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 2.492e-91
Identity = 138/152 (90.79%), Postives = 147/152 (96.71%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EKLA FDRERIPERVVHARGASAKGFFEVTHDVS LTCADFLRAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGNFDLVGNN PVFF+RDGMKFPDMVHA KP+ K+++QENWR+VDFFSHHPESLHMF+FL
Sbjct:   38 GPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSSKTNMQENWRVVDFFSHHPESLHMFTFL 189

HSP 2 Score: 60.077 bits (144), Expect = 2.492e-91
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK RP S  N+ ++TTNSGAPVWNNN+++T+G R
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 1.470e-88
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GPILLEDYH++EKLANF RERIPERVVHARG SAKGFFEVTHDV++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA KFYTREGNFD+VGNNFPVFF+RDG+KFPD+VHA KPNPKSHIQE WRI DF SHHPESL  F++
Sbjct:   38 GPILLEDYHMIEKLANFTRERIPERVVHARGMSAKGFFEVTHDVTDLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFATKFYTREGNFDIVGNNFPVFFIRDGIKFPDVVHAFKPNPKSHIQEYWRIFDFCSHHPESLSTFAW 188

HSP 2 Score: 64.3142 bits (155), Expect = 1.470e-88
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYKFRP+SS + PF+TTN+G PV NNNSSMT+GPR
Sbjct:    1 MDPYKFRPSSSNDTPFWTTNAGDPVSNNNSSMTVGPR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.638e-86
Identity = 126/152 (82.89%), Postives = 143/152 (94.08%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EK+A+F RERIPERVVHARGASAKGFFE THDV+++TCADFLR+PG QTPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNP+SH+QE WR+ DF SHHPESLH F FL
Sbjct:   38 GPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFL 189

HSP 2 Score: 58.9214 bits (141), Expect = 6.638e-86
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP KFRP+SSF+    TTN+GAPVWN+N ++T+GPR
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.638e-86
Identity = 126/152 (82.89%), Postives = 143/152 (94.08%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EK+A+F RERIPERVVHARGASAKGFFE THDV+++TCADFLR+PG QTPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNP+SH+QE WR+ DF SHHPESLH F FL
Sbjct:   38 GPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFL 189

HSP 2 Score: 58.9214 bits (141), Expect = 6.638e-86
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP KFRP+SSF+    TTN+GAPVWN+N ++T+GPR
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.473e-85
Identity = 128/152 (84.21%), Postives = 142/152 (93.42%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EK+A+F RERIPERVVHARGASAKGFFE THDV+ LTCADFLRAPG +TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNPKSH+QE WR+ DF SHHPESLH F FL
Sbjct:   38 GPILLEDYHLLEKIAHFARERIPERVVHARGASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLSHHPESLHTFFFL 189

HSP 2 Score: 56.9954 bits (136), Expect = 1.473e-85
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP KFRP+SSF+    TTN+G PVWN+N ++T+GPR
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNAGQPVWNDNEALTVGPR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.922e-85
Identity = 126/151 (83.44%), Postives = 142/151 (94.04%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GPILLEDYHLVEK+ NF RERIPERVVHARGASAKGFFEVTHD+++LTCADFLRAPGVQTP+IVRFSTVIHERGSPET+RDPRGFAVK YTR GN+DLVGNNFPVFF+RDG +FPD++HA KPNPKSHIQENWRI+D+ SH PESL+ F++
Sbjct:   38 GPILLEDYHLVEKIQNFTRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIRDPRGFAVKMYTRGGNWDLVGNNFPVFFIRDGTQFPDVIHAFKPNPKSHIQENWRILDYLSHLPESLNTFAW 188

HSP 2 Score: 63.1586 bits (152), Expect = 1.922e-85
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP K+RP+SSFN PF TTNSGAPVWNN  ++T+G R
Sbjct:    1 MDPSKYRPSSSFNTPFCTTNSGAPVWNNTCALTVGSR 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 5.565e-85
Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GPILLEDY L+EK+A F RERIPERVVH RGASAKGFFEVTHD+SNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRD M+FPD++ A KPNPKSH+QE WR +DF S+HPESL  F++
Sbjct:   38 GPILLEDYQLIEKIATFTRERIPERVVHRRGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQEPWRYLDFCSYHPESLLSFAW 188

HSP 2 Score: 63.1586 bits (152), Expect = 5.565e-85
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RP+S++N PF TTNSGAP+WNN + M++G R
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGER 37
[Close]
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 1.611e-84
Identity = 127/152 (83.55%), Postives = 143/152 (94.08%), Query Frame = 2 
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EK+A+F RERIPERVVHARGASAKGFFE THDV++LTCADFLRAPGV+TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNP+SH+QE WR+ DF SH PESLH F FL
Sbjct:   40 GPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTSLTCADFLRAPGVRTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHLPESLHTFFFL 191

HSP 2 Score: 56.6102 bits (135), Expect = 1.611e-84
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 3 
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP KFRP+SS +    TTN+GAPVWN+N ++T+GPR
Sbjct:    3 MDPTKFRPSSSHDTTVTTTNAGAPVWNDNEALTVGPR 39
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA1_HORVU2.971e-9291.45Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA1_NICPL5.056e-9293.42Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_WHEAT2.492e-9190.79Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA2_RICCO1.470e-8887.42Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA1_ORYSJ6.638e-8682.89Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI6.638e-8682.89Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU1.473e-8584.21Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_IPOBA1.922e-8583.44Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA3_CUCPE5.565e-8584.77Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]
CATA3_MAIZE1.611e-8483.55Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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