CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 7.935e-84
Identity = 127/151 (84.11%), Postives = 143/151 (94.70%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDY L++KLA+F RERIPERVVHARGA+AKGFFEVTHDVS+LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFD+VGNNFPVFF+RD +KFPD++HA KPNPKSHIQE+WRI+DF SH PESL  F++
Sbjct:   38 GPVLLEDYQLIDKLAHFTRERIPERVVHARGATAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDIVGNNFPVFFIRDAIKFPDVIHAFKPNPKSHIQESWRILDFCSHFPESLLTFAW 188          

HSP 2 Score: 56.9954 bits (136), Expect = 7.935e-84
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+ P+SSFN P  TTN G PV+N+NSS+T+G R
Sbjct:    1 MDPYKYCPSSSFNTPHTTTNGGHPVYNDNSSLTVGTR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.035e-83
Identity = 126/151 (83.44%), Postives = 140/151 (92.72%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GPILLEDY L+EK+A F RERIPERVVHARGASAKGFFEVTHDVS+L+CADFLRAPGVQTPVIVRFSTVIHER SPET+RDPRGFAVKFYTREGNFDLVGNNFPVFFVRD M+FPD++ A KPNPKSH+QE+WR +DF S+HPESL  F++
Sbjct:   38 GPILLEDYQLIEKIATFTRERIPERVVHARGASAKGFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIHERVSPETVRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQESWRFLDFCSYHPESLLSFAW 188          

HSP 2 Score: 63.1586 bits (152), Expect = 1.035e-83
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RP+S++N PF TTNSGAP+WNN + M++G R
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGER 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 2.297e-83
Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDYHL+EKLA FDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTV+HERGSPE+LRD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQE WRI+DFFS  PESLH F++
Sbjct:   38 GPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWRILDFFSFLPESLHTFAW 188          

HSP 2 Score: 60.077 bits (144), Expect = 2.297e-83
Identity = 24/37 (64.86%), Postives = 33/37 (89.19%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP KFRP+S++++PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDPSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 268.085 bits (684), Expect = 2.297e-83
Identity = 124/146 (84.93%), Postives = 138/146 (94.52%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESL 655
            GP+LLEDYHL+EK+ANF RERIPERVVHARG SAKGFFEVTHD+SNLTCADFLRAPGVQTPVIVRFSTV+HER SPET+RD RGFAVKFYTREGNFDLVGNN PVFF+RDG++FPD+VHALKPNPK++IQE WRI+D+ SH PESL
Sbjct:   38 GPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESL 183          

HSP 2 Score: 63.1586 bits (152), Expect = 2.297e-83
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RP+S++NAPF+TTN GAPV NN SS+TIG R
Sbjct:    1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGER 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 1.476e-82
Identity = 129/151 (85.43%), Postives = 138/151 (91.39%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDYHL+EKLA FDRERIPERVVHARGASAKGFFEVTHDVS+LTCADFLRAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F
Sbjct:   38 GPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAF 188          

HSP 2 Score: 54.6842 bits (130), Expect = 1.476e-82
Identity = 22/37 (59.46%), Postives = 31/37 (83.78%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MD  K+RP+S+++ PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDLSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 4.272e-82
Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDY+L+EKLA FDRE+IPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F
Sbjct:   38 GPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAF 188          

HSP 2 Score: 58.5362 bits (140), Expect = 4.272e-82
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP K+RP+S+++ PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 4.272e-82
Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDY+L+EKLA FDRE+IPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F
Sbjct:   38 GPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAF 188          

HSP 2 Score: 58.5362 bits (140), Expect = 4.272e-82
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP K+RP+S+++ PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.613e-81
Identity = 127/151 (84.11%), Postives = 137/151 (90.73%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQENWRI+DFFS  PESLH F+F
Sbjct:   38 GPVLLEDYHLIEKLATFVRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAF 188          

HSP 2 Score: 55.0694 bits (131), Expect = 1.613e-81
Identity = 22/37 (59.46%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MD  K+RP+S++++PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDLSKYRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 2.744e-81
Identity = 126/151 (83.44%), Postives = 137/151 (90.73%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDYHL+EKLA FDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVI RFSTV+HERGSPE+LRD RGFAVKFYTREGNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQE W+I+DFFS  PESLH F++
Sbjct:   38 GPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWKILDFFSFLPESLHTFAW 188          

HSP 2 Score: 56.225 bits (134), Expect = 2.744e-81
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MD  KFRP+S++++PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDLSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.273e-79
Identity = 120/151 (79.47%), Postives = 133/151 (88.08%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSF 670
            GP+LLEDY+L+EKLA FDRE+IPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPG QTPVI RFSTV+HERGSPE++RD RGF VKFY R GNFDLVGNN PVFF RD   FPD + ALKPNPKSHIQE+WR +DFFS  PESLH F+F
Sbjct:   38 GPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFGVKFYNRGGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEDWRTLDFFSFLPESLHTFAF 188          

HSP 2 Score: 58.5362 bits (140), Expect = 4.273e-79
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP K+RP+S+++ PF TTN+G PV+NN SS+T+GPR
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPR 37          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_AVIMR7.935e-8484.11Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA2_CUCPE1.035e-8383.44Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA2_NICPL2.297e-8384.77Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA3_ARATH2.297e-8384.93Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA_SOLME1.476e-8285.43Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_SOLTU4.272e-8282.78Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLLC4.272e-8282.78Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA_CAPAN1.613e-8184.11Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA1_TOBAC2.744e-8183.44Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA1_SOLTU4.273e-7979.47Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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