CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 7.942e-78
Identity = 119/152 (78.29%), Postives = 134/152 (88.16%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHL+EK+A+F R+ IPE  VHA  ASAKGFFE THDV+ LTCADFL +PG  TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGN+DL+GNNFPVFF+RDG+KFPD++HA KPNPKSH+QE WR+ DF  HHPESLH F FL
Sbjct:   38 GPILLEDYHLLEKIAHFARD-IPEPFVHAGRASAKGFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLPHHPESLHTFFFL 188          

HSP 2 Score: 56.225 bits (134), Expect = 7.942e-78
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDP KFRP+SSF+    TTN G PVWN+N ++T+GPR
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNPGQPVWNDNEALTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 4.011e-52
Identity = 95/154 (61.69%), Postives = 117/154 (75.97%), Query Frame = 2
Query:  212 LTGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            L GP LLEDY L+EKLA+FDRER+PERVVHARGA A G F     +   T A+FL+  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D VGNN PVFF+RD +KFPD++H+LKP+P+++IQ+  R  DFFS  PE+  M  +L
Sbjct:   26 LKGPTLLEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTIANFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLSPEATTMIMYL 179          

HSP 2 Score: 26.9498 bits (58), Expect = 4.011e-52
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIG 194
            TTN G PV +N +SMT G
Sbjct:    8 TTNQGTPVGDNQNSMTAG 25          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.343e-51
Identity = 93/152 (61.18%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP L+EDY L+EKLA+FDRER+PERVVHARGA A G F     +   T A FL+  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D VGNN PVFF+RD +KFPD++H+LKP+P+++IQ+  R  DFFS  PE+  M  +L
Sbjct:   28 GPTLIEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMIMYL 179          

HSP 2 Score: 26.9498 bits (58), Expect = 3.343e-51
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIG 194
            TTN G PV +N +SMT G
Sbjct:    8 TTNQGVPVGDNQNSMTAG 25          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 196.823 bits (499), Expect = 3.343e-51
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP L++D HL+EKLA+F+RER+PERVVHA+GA A G+FEVT+DV+  T A FL   G +TP+ +RFSTV  E GS +T+RDPRGFAVKFYT EGN+D+VGNN PVFF+RD +KFPD +H  K +PK+H++    + DF+S  PESLH  + L
Sbjct:   27 GPTLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTVAGELGSADTVRDPRGFAVKFYTEEGNYDIVGNNTPVFFIRDAIKFPDFIHTQKRDPKTHLKNPTAVWDFWSLSPESLHQVTIL 178          

HSP 2 Score: 26.9498 bits (58), Expect = 3.343e-51
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT+ GAPV +N +SMT G R
Sbjct:    7 TTSWGAPVGDNQNSMTAGSR 26          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.317e-50
Identity = 97/165 (58.79%), Postives = 120/165 (72.73%), Query Frame = 2
Query:  179 INDDWT*SCFNLTGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            I D+       L GP LLEDY L+EKLA+FDRER+PERVVHARGA A G F     +   T A FL+  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D VGNN PVFF+RD +KFPD++H+LKP+P+++IQ+  R  DFFS  PE+  M ++L
Sbjct:   15 IGDNQNSMTAGLKGPTLLEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTKAQFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMITYL 179          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G +LL+D HL++KL  F RERIPERVVHARG  A G F  + D S+LT +    + G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFSH P S HM +++
Sbjct:   45 GSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAPFTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSHEPGSTHMLTWV 196          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 93/152 (61.18%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G +LL+D HL++KL  F RERIPERVVHARG  A G F  + D S+LT +      G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFSH P + HM +++
Sbjct:   45 GSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTVSAPFTEKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFFDFFSHEPSATHMLTWV 196          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 5.137e-49
Identity = 91/152 (59.87%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G +LL+D  L++KL  FDRERIPERVVHARG  A G F  + D+S+L+ A   R  G +TPV VRFS V+H   SPETLRDPRGFA KFYT +GN+DLVGNNFP FF+RD +KFPDMVHA KP+P+S++ ++ R  DFFSH PE+    + L
Sbjct:   54 GSVLLQDVQLLQKLQRFDRERIPERVVHARGTGAHGEFVASADISDLSMAKVFRK-GEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLL 204          

HSP 2 Score: 26.9498 bits (58), Expect = 5.137e-49
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 3
Query:  120 SFNAPFFTTNSGAPVWNNNSSMTIGP 197
            S  A   T ++GAPV +N +S T GP
Sbjct:   27 SVQAATLTRDNGAPVGDNQNSQTAGP 52          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 9.441e-49
Identity = 92/152 (60.53%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G +LL+D HL++KL  F RERIPERVVHARG  A G F V+ D S+LT +      G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFS  P + +M +++
Sbjct:   45 GSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVVSGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWV 196          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.747e-48
Identity = 91/152 (59.87%), Postives = 114/152 (75.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G +LL+D HL++KL  F RERIPERVVHARG  A G F  + D S+LT +      G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GN+DLVGNN PVFF+RD +KFPDMVH+LKP+P +++Q+  R  DFFS  P + +M +++
Sbjct:   45 GSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWV 196          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_SECCE7.942e-7878.29Catalase OS=Secale cereale PE=2 SV=1[more]
CATA_LISIN4.011e-5261.69Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISMO3.343e-5161.18Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_BACSU3.343e-5159.87Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_LISSE1.317e-5058.79Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATA_VIBCH2.247e-5061.84Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_VIBPA2.935e-5061.18Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATB_PSEAE5.137e-4959.87Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_VIBVU9.441e-4960.53Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA_VIBVY2.747e-4859.87Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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