CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11165 contig Csv1_Contig11165:96..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 4.685e-48
Identity = 85/152 (55.92%), Postives = 118/152 (77.63%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D   ++++A+FDRERIPERVVHA+GA A G+FEVTHD++    AD     G QTP++VRFSTV  E GS +T+RDPRGF++KFYT EGN+DLVGNN P+FF+RD + FP+ +HALK NP++H+++   + DF+ + PES+H   FL
Sbjct:   44 GPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFL 195          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 7.992e-48
Identity = 86/152 (56.58%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D   ++++A+FDRERIPERVVHA+GA A G+FEVTHD+S    AD     G QTP+++RFSTV  E GS +T RDPRGFA+KFYT EGN+DLVGNN P+FF+RD + FP+ +H  K NP++H+++   I DF+ H PE+LH   FL
Sbjct:   44 GPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFL 195          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.044e-47
Identity = 87/152 (57.24%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP +L ++HL++KLA+FDRERIPERVVHA+G  A G+FEVTHD++    A      G +TPV  RFSTV  E GS +T RDPRGFA+KFYT EGN+D+VGNN P+FFVRD +KFPD +H  K +P++H+ +   + DFFS  PES+H  +FL
Sbjct:   37 GPAILSNFHLIDKLAHFDRERIPERVVHAKGGGAFGYFEVTHDITRFCKAKLFEKIGKRTPVFARFSTVAGESGSADTRRDPRGFALKFYTEEGNWDMVGNNTPIFFVRDAIKFPDFIHTQKRHPQTHLHDPNMVWDFFSLVPESVHQVTFL 188          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.780e-47
Identity = 89/152 (58.55%), Postives = 114/152 (75.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D  L++KL  FDRERIPERVVHARG   KG F  + D+S+L+ A   ++ G +TPV VRFS+V+H   SPETLRDP GFA KFYT +GN+DLVGNNFP FF+RD +KFPDMVHA KP+P++++  + R  DFFSH PE+    + L
Sbjct:   51 GPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVFKS-GEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLL 201          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 4.644e-47
Identity = 88/155 (56.77%), Postives = 111/155 (71.61%), Query Frame = 2
Query:  212 LTGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEV-THDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            + GPIL++D+ L++KLA+FDRERIPERVVHA+GA A G+FEV + DV     A FL   G +TP+  RFSTV  E+GS ++ RDPRGFAVKFYT EGNFD+VGNN PVFF+RD  KFPD +H  K NP+++ ++     DF    PES H  S L
Sbjct:   25 VNGPILIQDFTLIDKLAHFDRERIPERVVHAKGAGAHGYFEVPSSDVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDPRGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKDPNMFWDFLGQTPESTHQVSIL 179          

HSP 2 Score: 30.8018 bits (68), Expect = 4.644e-47
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  126 NAPFFTTNSGAPVWNNNSSMTIG 194
            +AP  TT+SG+P+ NN +SMT G
Sbjct:    2 SAPVLTTSSGSPIDNNLNSMTAG 24          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.645e-47
Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP LL+D   +EKLA+FDRERIPERVVHA+G+ A G F VTHD+S  T A      G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L
Sbjct:   30 GPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTIL 181          

HSP 2 Score: 31.187 bits (69), Expect = 4.645e-47
Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +GAPV +NN++MT GPR
Sbjct:   10 TTAAGAPVADNNNTMTAGPR 29          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.645e-47
Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP LL+D   +EKLA+FDRERIPERVVHA+G+ A G F VTHD+S  T A      G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L
Sbjct:   30 GPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTIL 181          

HSP 2 Score: 31.187 bits (69), Expect = 4.645e-47
Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +GAPV +NN++MT GPR
Sbjct:   10 TTAAGAPVADNNNTMTAGPR 29          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.645e-47
Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP LL+D   +EKLA+FDRERIPERVVHA+G+ A G F VTHD+S  T A      G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L
Sbjct:   30 GPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTIL 181          

HSP 2 Score: 31.187 bits (69), Expect = 4.645e-47
Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +GAPV +NN++MT GPR
Sbjct:   10 TTAAGAPVADNNNTMTAGPR 29          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.180e-47
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D HL+EKLA F+RERIPERVVHARG+ A G FEVT DVS  T ADFL   G +T V +RFSTV    G  + +RDPRGFA+KFYT EGN+DLVGNN PVFF++D +KFPD +H+ K +P +  QE   + DF++H PE+ H  ++L
Sbjct:   27 GPLLIQDQHLIEKLARFNRERIPERVVHARGSGAYGHFEVTDDVSGFTHADFLNTVGKRTEVFLRFSTVADSLGGADAVRDPRGFALKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVFDFWAHSPEATHQITWL 178          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.180e-47
Identity = 91/157 (57.96%), Postives = 112/157 (71.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVT-----HDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+ LE+Y  +EKL++FDRERIPERVVHARG  A G F  T       VS  T A   +  G +TPV VRFSTV H   SPETLRDPRGFAVKFYT +GN+DLVGNN  +FF+RD +KFPD++H+ KP+P ++IQ   RI DFF+  PE+ HM + L
Sbjct:   54 GPMTLENYQFIEKLSHFDRERIPERVVHARGVGAHGVFRATGKVGDEPVSKYTRAKLFQEDGKETPVFVRFSTVGHGTHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKIFFIRDALKFPDLIHSQKPSPTTNIQSQERIFDFFAGSPEATHMITLL 210          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_CAEEL4.685e-4855.92Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATA1_CAEEL7.992e-4856.58Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_TOXGO1.044e-4757.24Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]
CATB_PSESY1.780e-4758.55Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_DICDI4.644e-4756.77Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_BORPE4.645e-4757.24Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA4.645e-4757.24Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR4.645e-4757.24Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_STRCO5.180e-4757.89Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CATA_DEIRA5.180e-4757.96Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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