CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.890e-47
Identity = 86/152 (56.58%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D+HL+EKLA+F+RE IPER VHA+G+ A G F VT D++  T A    + G QTP  +RFSTV  ERGS +T RDPRGFA+KFYT EGN+D+VGNN PVFF+RD +KFPD +H  K  P+S+++    + DF+SH PE+LH  + L
Sbjct:   28 GPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTQDITQYTSAKLFDSVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTIL 179          

HSP 2 Score: 25.409 bits (54), Expect = 7.890e-47
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT SG PV +N +S + GPR
Sbjct:    8 TTASGPPVADNQNSRSAGPR 27          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.836e-47
Identity = 90/157 (57.32%), Postives = 113/157 (71.97%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEV-----THDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP  LE+Y  +EK+++FDRERIPERVVHARGA A G+FE         +S  T A   +  G +TP  VRFSTV H + SPETLRDPRGFAVK YT +GN+DLVGNN  +FF+RD +KFPD+VHA +P+P ++IQ+  RI DF S  PE+ HM +FL
Sbjct:   56 GPTTLENYDFLEKISHFDRERIPERVVHARGAGAHGYFEAYGSFGDEPISTYTRAKLFQEKGKKTPAFVRFSTVNHGKHSPETLRDPRGFAVKLYTEDGNWDLVGNNLKIFFIRDPLKFPDLVHAFQPDPVTNIQDGERIFDFISQSPEATHMITFL 212          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.027e-46
Identity = 82/152 (53.95%), Postives = 109/152 (71.71%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D   ++++A+FDRERIPERVVHA+G  A GFFEVT D++    AD     G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGN+DLVGNN P+FF+RD + FP+ +H  K NP +H+++   + DFFS  PE+ H    L
Sbjct:   47 GPLLLQDVVFLDEMAHFDRERIPERVVHAKGGGAHGFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTHLKDPNMMWDFFSLRPETTHQVMIL 198          

HSP 2 Score: 33.113 bits (74), Expect = 1.027e-46
Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 3
Query:  117 SSFNAPF-FTTNSGAPVWNNNSSMTIGPR 200
            +S   PF  TT++GAP++N  +S+T+GPR
Sbjct:   18 NSQTKPFVLTTSNGAPIFNKKASLTVGPR 46          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.339e-46
Identity = 85/152 (55.92%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGN+DL GNN P FF+RD +  P  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          

HSP 2 Score: 24.6386 bits (52), Expect = 1.339e-46
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +G P+ +  ++MT GPR
Sbjct:   28 TTGAGVPIGDKLNAMTAGPR 47          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 186.037 bits (471), Expect = 1.507e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.968e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 2.571e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 2.571e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 4.385e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD M FP  +H+ K NP++H+++   + DF+S  PESLH  +FL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFL 199          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_ONCVE7.890e-4756.58Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATX_BACSU8.836e-4757.32Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_ASCSU1.027e-4653.95Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_DANRE1.339e-4655.92Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_PIG1.507e-4655.92Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATA_BOVIN1.968e-4655.92Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA_MOUSE2.571e-4655.92Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATA_CANFA2.571e-4655.92Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_PONAB3.358e-4655.92Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_RAT4.385e-4655.92Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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