CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 4.385e-46
Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 5.039e-46
Identity = 85/152 (55.92%), Postives = 110/152 (72.37%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D+HL+EKLA+F+RE IPER VHA+G+ A G F VT D++  T A      G QT   +RFSTV  ERGS +T RDPRGFAVKFYT EGN+D+VGNN PVFF+RD +KFPD +H  K +P+S+++      D +SH PE+LH  + L
Sbjct:   26 GPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITGYTSAKLFEQVGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQIFWDSWSHSPEALHQVTIL 177          

HSP 2 Score: 27.335 bits (59), Expect = 5.039e-46
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT SGAPV +N +S + GPR
Sbjct:    6 TTASGAPVADNQNSRSAGPR 25          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 5.727e-46
Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DL GNN P+FFVRD M FP  +H+ K NP++H+++   + DF++  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFFVRDAMLFPSFIHSQKRNPQTHMKDPDMVWDFWALRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 5.727e-46
Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A G+FEVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF+RD + FP  +H+ K NP++H++    + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKHPDMVWDFWSLRPESLHQVSFL 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_MYCAV (Catalase HPII OS=Mycobacterium avium GN=katE PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.480e-46
Identity = 101/193 (52.33%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  125 QRPLLYHQFRRSG---MEQQLINDDWT*SCFNL--TGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD-VSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFL 673
            QR L   +FRR       QQ +  D T     +   GP LLED+H  EK+ +FD ERIPERVVHARGA A G+FE   D ++  T A FL +PG +TPV VRFSTV   RGS +T+RD RGFA KFYT +GN+DLVGNNFPVFF++DG+KFP +VHA+KP P + I +    +  + DF S  PE+LH   +L
Sbjct:   14 QRDLESARFRRDTGYLTTQQGVRVDHTDDALTVGERGPTLLEDFHAREKITHFDHERIPERVVHARGAGAYGYFEPYDDRLAQYTAAKFLTSPGTRTPVFVRFSTVAGSRGSADTVRDVRGFATKFYTEQGNYDLVGNNFPVFFIQDGIKFPVLVHAVKPEPHNEIPQAQSAHDTLWDFVSLQPETLHAIMWL 206          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.480e-46
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D HL++KL++FD ERIPERVVHA+GA A G+FEVT DV+  T A FL   G +T V VRFSTV  E+GS ++ RDPRGFAVKFYT +GN+DLVGNN PVFF+RD +KFPD +H  K NP ++ ++     DF S  PES+H  + L
Sbjct:   31 GPVLMQDVHLLDKLSHFDHERIPERVVHAKGAGAGGYFEVTADVTKYTKAKFLSEIGKRTEVFVRFSTVGGEKGSADSARDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDPLKFPDFIHTQKRNPATNCKDPDMFWDFLSLTPESIHQVTIL 182          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.469e-45
Identity = 87/152 (57.24%), Postives = 112/152 (73.68%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++DY L+EKLA+F+RERIPERVVHA+GA AKG+F+VT D+S  T A      G +TP+I RFS V  E G P+T RD RGFAVKFYT EGN+D+VGNN PVFFV D +KFPD +H+ K +P++H +      DF+S  PES+H  + L
Sbjct:   26 GPVLIQDYQLLEKLAHFNRERIPERVVHAKGAGAKGYFKVTKDMSAYTKAAVFSGVGKKTPLITRFSQVAGEAGYPDTYRDVRGFAVKFYTEEGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHARSQDMQWDFWSLSPESVHQVTIL 177          

HSP 2 Score: 22.3274 bits (46), Expect = 2.469e-45
Identity = 10/20 (50.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TTN G P  +N  S T G R
Sbjct:    6 TTNEGQPWADNQHSQTAGQR 25          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.849e-45
Identity = 93/156 (59.62%), Postives = 112/156 (71.79%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI----QENWRIVDFFSHHPESLHMFSFL 673
            GP LLED+ + EK+ +FD ERIPERVVHARG++A G+FE   D+S+LT A FL   G +TPV VRFSTV   RGS +T+RD RGFAVKFYT EGNFDLVGNN PVFF++D +KFPD VHA+KP P + I      +    DF S  PES HM  +L
Sbjct:   63 GPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGYFEAYEDLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGASAHDTFWDFVSLTPESAHMVMWL 218          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 179.489 bits (454), Expect = 5.458e-45
Identity = 84/152 (55.26%), Postives = 112/152 (73.68%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D    +++A+FDRERIPERVVHA+GA A  +FEVTHD++    A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT EG +DLVGNN P+FF+RD + FP  +H+ K NP++H+++   + DF+S  PESLH  SFL
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFAYFEVTHDITKYCKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEEGIWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMMWDFWSLRPESLHQVSFL 199          

HSP 2 Score: 23.483 bits (49), Expect = 5.458e-45
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT  G PV +  + MT+GPR
Sbjct:   28 TTAGGNPVGDKLNIMTVGPR 47          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.406e-44
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHM 661
            GP L+ED+H  EK+ +FD ERIPERVVHARG    GFF+V   ++  T A FL+ P V+TPV VRFSTV   +GS +T+RD RGFA KFYT EGN+DLVGNN PVFF++D +KFPD+VHA KP P + + +    +    DF +++PES HM
Sbjct:   51 GPTLMEDFHFREKMTHFDHERIPERVVHARGFGVHGFFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHAFKPEPHNEMPQAATAHDTFWDFVANNPESAHM 202          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_HUMAN4.385e-4655.92Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATA_PSEPU5.039e-4655.92Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATA_RANRU5.727e-4655.92Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_CALJA5.727e-4655.92Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATE_MYCAV7.480e-4652.33Catalase HPII OS=Mycobacterium avium GN=katE PE=3 ... [more]
CATA_METBF7.480e-4657.89Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_LACSK2.469e-4557.24Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATE_PSEAE4.849e-4559.62Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_CAVPO5.458e-4555.26Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]
CATE_BACSU2.406e-4455.92Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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