CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.105e-44
Identity = 86/152 (56.58%), Postives = 109/152 (71.71%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHM 661
            GP L+ED+H  EK+ +FD ERIPER+VHARG +A G F+V   +   T A FL+ P V+TPV VRFSTV   +GS ET+RD RGFA KFYT EGN+DLVGNN PVFF++D +KFPD+VHALKP P + I +    +    DF +++ ES HM
Sbjct:   48 GPTLMEDFHFREKMTHFDHERIPERIVHARGFAAHGEFQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHALKPEPHNEIPQAQSAHDTFWDFIANNQESAHM 199          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 1.005e-43
Identity = 80/152 (52.63%), Postives = 109/152 (71.71%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+    +EKLA FDRERIPERVVHA+G+ A G F VT D++  T A      G +T    RFSTV  ERGS + +RDPRGFA+K+YT EGN+DLVGNN PVFF+RD +KFPD +H  K +P++++  +  + DF+S+ PESL+  +++
Sbjct:   29 GPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWV 180          

HSP 2 Score: 30.8018 bits (68), Expect = 1.005e-43
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT  GAPVW++N+ +T GPR
Sbjct:    9 TTAFGAPVWDDNNVITAGPR 28          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.776e-43
Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILL+D + ++++++FDRERIPERVVHA+GA A G+FEVTHD++    A        +TP+ VRFSTV  E GS +T RDPRGFAVKFYT +G +DLVGNN PVFF+RD + FP  +H  K NP++H+++     DF +  PES H    L
Sbjct:   46 GPILLQDVNFLDEMSHFDRERIPERVVHAKGAGAFGYFEVTHDITQYCAAKIFDKVKKRTPLAVRFSTVGGESGSADTARDPRGFAVKFYTEDGVWDLVGNNTPVFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFLTLRPESAHQVCIL 197          

HSP 2 Score: 26.9498 bits (58), Expect = 3.776e-43
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +GAP+   ++S T+GPR
Sbjct:   26 TTGNGAPIGIKDASQTVGPR 45          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.921e-43
Identity = 79/152 (51.97%), Postives = 108/152 (71.05%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+    +EKLA FDRERIPERVVHA+G+ A G F VT D++  T A      G +T    RFSTV  E+GS + +RDPRGFA+K+YT EGN+DLVGNN PVFF+RD +KFPD +H  K +P++++     + DF+S+ PESL+  +++
Sbjct:   29 GPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTWV 180          

HSP 2 Score: 30.8018 bits (68), Expect = 4.921e-43
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT  GAPVW++N+ +T GPR
Sbjct:    9 TTAFGAPVWDDNNVITAGPR 28          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.922e-43
Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G I+L+DY L+EKLA+ +RERIPERVVHA+G  A G  ++T D+S  T A  L+ PG +TP++ RFSTV  E+G+ +  RD RGFA+KFYT EGN+DLVGNN PVFF+RD  KFPD +H  K +PK++++    + D++S  PESLH  + L
Sbjct:   28 GGIMLQDYQLIEKLAHQNRERIPERVVHAKGWGAFGSLKITGDISQYTRAKCLQ-PGAETPMLARFSTVAGEQGAADHERDVRGFALKFYTDEGNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPKTNLRSATAMWDYWSLSPESLHQVTIL 178          

HSP 2 Score: 31.187 bits (69), Expect = 4.922e-43
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  132 PFFTTNSGAPVWNNNSSMTIGPR 200
            P  TT +GAPV +N +S+T GPR
Sbjct:    5 PTITTTAGAPVPDNQNSLTAGPR 27          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.320e-42
Identity = 81/152 (53.29%), Postives = 108/152 (71.05%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D+  ++ LA+FDRERIPERVVHA+GA A G FEVT D+S++  A FL   G +T +  RFSTV  E+GS ++ RDPRGFA KFYT EGN DLV NN P+FF+RD  KFP  +H  K NP ++ ++     D+ +++PESLH   +L
Sbjct:   36 GPLLLQDFKFLDSLAHFDRERIPERVVHAKGAGAYGVFEVTEDISDICSAKFLDTVGKKTKIFTRFSTVGGEKGSSDSARDPRGFATKFYTEEGNLDLVYNNTPIFFIRDPTKFPHFIHTQKRNPATNCKDANMFWDYLTNNPESLHQIMYL 187          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 2.252e-42
Identity = 84/152 (55.26%), Postives = 111/152 (73.03%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPIL++DY L+EKL++ +RERIPER VHA+G  A G   +T D+S  T A  L+ PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN PVFFVRD +KFPD +H  K +P++H++    + DF+S  PESLH  + L
Sbjct:   28 GPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTIL 178          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.252e-42
Identity = 84/152 (55.26%), Postives = 111/152 (73.03%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPIL++DY L+EKL++ +RERIPER VHA+G  A G   +T D+S  T A  L+ PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN PVFFVRD +KFPD +H  K +P++H++    + DF+S  PESLH  + L
Sbjct:   28 GPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTIL 178          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.252e-42
Identity = 84/152 (55.26%), Postives = 111/152 (73.03%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPIL++DY L+EKL++ +RERIPER VHA+G  A G   +T D+S  T A  L+ PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGN+DLVGNN PVFFVRD +KFPD +H  K +P++H++    + DF+S  PESLH  + L
Sbjct:   28 GPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESLHQVTIL 178          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 6.553e-42
Identity = 81/152 (53.29%), Postives = 108/152 (71.05%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D++L++ LA+FDRERIPERVVHA+G+ A G FEVT D++++  A FL   G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DLV NN PVFF+RD  KFP  +H  K NP++H+++     D+ + + ES+H    L
Sbjct:   26 GPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTTNEESVHQVMVL 177          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATE_BACPF4.105e-4456.58Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATA_HELPY1.005e-4352.63Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_DROME3.776e-4353.29Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATA_HELPJ4.921e-4351.97Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA_RHIME4.922e-4353.95Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_CANBO1.320e-4253.29Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]
CATA_BRUSU2.252e-4255.26Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATA_BRUME2.252e-4255.26Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB2.252e-4255.26Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]
CATA_CANTR6.553e-4253.29Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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