CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11165 contig Csv1_Contig11165:96..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 9.054e-42
Identity = 78/147 (53.06%), Postives = 108/147 (73.47%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLH 658
            GP+LL+D   +EKLA+FDRE IPER +HA+G+ A G F VTHD+++ T A      G +T + VRFSTV  ERG+ +  RD RGFA+KFYT +GN+DLVGNN PVFF+RD +KFPD+ HA+K +P+++++      DF++  PE+LH
Sbjct:   27 GPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITSYTKAALFSKIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEQGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFWTSLPEALH 173          

HSP 2 Score: 31.5722 bits (70), Expect = 9.054e-42
Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TTN+GAPV +N ++MT GPR
Sbjct:    7 TTNAGAPVPDNQNAMTAGPR 26          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.118e-41
Identity = 88/152 (57.89%), Postives = 107/152 (70.39%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI----QENWRIVDFFSHHPESLHM 661
            GP LLED+ + EK+ +FD ERIPER+VHARG  A G+F+   + ++LT A FL+ P   TPV VRFSTV   RGS +T+RD RGFAVKFYT EGNFDLVGNN PVFF++D +KFPD VHA+KP P + I      +    DF S  PES HM
Sbjct:   65 GPSLLEDFIMREKITHFDHERIPERIVHARGTGAHGYFQSYGNHADLTKAGFLQDPDKITPVFVRFSTVQGPRGSGDTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHM 216          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.460e-41
Identity = 83/151 (54.97%), Postives = 105/151 (69.54%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLH 658
            GP LLED+   +K+ +FD ER+PER VHARGA A G F    D +N+T A FL + G +TPV VRFSTV   RGS +T+RD  GFA +FYT EGNFD+VGNN PVFF++D + FPD+VHA+KP+P S I +    +    DFFS  P +LH
Sbjct:   76 GPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAYGTFTSYADWTNITAASFLNSKGKETPVFVRFSTVAGSRGSADTVRDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLVHAVKPSPDSEIPQAATGHDSAWDFFSQQPSTLH 226          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_CANAL (Peroxisomal catalase OS=Candida albicans GN=CTA1 PE=2 SV=4)

HSP 1 Score: 169.474 bits (428), Expect = 1.460e-41
Identity = 80/152 (52.63%), Postives = 107/152 (70.39%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D++L++ LA+FDRERIPERVVHA+G+ A G FEVT D++++  A FL   G +T +  RFSTV  E GS +T RDPRGFA K YT EGN DLV NN PVFF+RD  KFP  +H  K NP++H+++     D+ + + ES+H    L
Sbjct:   26 GPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDICAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKIYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTSNEESIHQVMVL 177          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.536e-41
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D HL++   +FDRERIPERVVHA+G+ A G FE T D++  T        G +TP++ RFSTV  ERG+P+T RDPRGFA+KFYT EG FD+VGNN PVFF+RD  KFP  +H  K NP++ +++     D+ S + ES+H    L
Sbjct:   33 GPVLLQDSHLIDVFQHFDRERIPERVVHAKGSGAFGEFECTDDITKYTKHTMFSKVGKKTPMVARFSTVGGERGTPDTARDPRGFALKFYTDEGIFDMVGNNTPVFFLRDPAKFPLFIHTQKRNPQNDMKDATMFWDYLSQNAESIHQVMIL 184          

HSP 2 Score: 25.7942 bits (55), Expect = 1.536e-41
Identity = 9/25 (36.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  120 SFNAPFFTTNSGAPVWNNNSSMTIG 194
            S   P +TTN+G P++N  ++  +G
Sbjct:    6 SNTVPVYTTNTGCPIFNPMAAARVG 30          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.537e-41
Identity = 79/150 (52.67%), Postives = 107/150 (71.33%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFS 667
            GP+LL+D   +EKLA+FDRE IPER +HA+G+ A G F VTHD++  T A      G +T +  RFSTV  ERG+ +  RD RGFA+KFYT EGN+D+VGNN PVF++RD +KFPD+ H +K +P+++++      DFFSH PESLH  +
Sbjct:   27 GPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLT 176          

HSP 2 Score: 28.4906 bits (62), Expect = 1.537e-41
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  141 TTNSGAPVWNNNSSMTIGPR 200
            TT +GAPV +NN+ +T GPR
Sbjct:    7 TTAAGAPVVDNNNVITAGPR 26          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.907e-41
Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LL+D+ L++ L++FDRERIPERVVHA+GA A G FEVT D++++  A FL   G +T +  RFSTV  E+GS +T RDPRGFA KFYT +GN DLV NN P+FF+RD +KFP  +H  K NP +++++     D+ + + ESLH   +L
Sbjct:   38 GPLLLQDFKLIDTLSHFDRERIPERVVHAKGAGAYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFFIRDPIKFPHFIHTQKRNPATNLKDPNMFWDYLTANDESLHQVMYL 189          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.907e-41
Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+L++D  L+EKLA+F+RERIPERVVHARGA A G F +T DVS  T A FL   G +T   +RFSTV    G+ + +RDPRG+A+KFYT EGN+DLVGNN PVFF++D +KFPD +H  K +P +  QE   + DF+   PES H  ++L
Sbjct:   27 GPVLVQDQLLLEKLAHFNRERIPERVVHARGAGAYGTFTLTRDVSRWTRAAFLSEVGKRTETFLRFSTVAGSLGAADAVRDPRGWALKFYTEEGNYDLVGNNTPVFFIKDAIKFPDFIHTQKRDPYTGSQEADNVWDFWGLSPESTHQVTWL 178          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.490e-41
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLH 658
            GP LLED+   +K+ +FD ER+PER VHARGA A G F   ++ SN+T A FL A G QTPV VRFSTV   RGS ++ RD  GFA + YT EGNFD+VGNN PVFF++D ++FPD++HA+KP P S I +    +    DFFS  P SLH
Sbjct:   80 GPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAHGVFTSYNNWSNITAASFLNAAGKQTPVFVRFSTVAGSRGSVDSARDIHGFATRLYTDEGNFDIVGNNVPVFFIQDAIQFPDLIHAVKPQPDSEIPQAATAHDTAWDFFSQQPSSLH 230          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.547e-41
Identity = 81/156 (51.92%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFL 673
            GP L+ED+H  EK+ +FD ERIPERVVHARG    GFFE    ++  T AD  + PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGN+DLVGNN PVFF++D +KFPD++H++KP P     +    +    DF S  PES+HM  ++
Sbjct:   61 GPTLIEDFHFREKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEPDREFPQAQSAHDNFWDFISLTPESMHMIMWV 216          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_DESVM9.054e-4253.06Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATE_PSEPU1.118e-4157.89Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_ERYGR1.460e-4154.97Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATA_CANAL1.460e-4152.63Peroxisomal catalase OS=Candida albicans GN=CTA1 P... [more]
CATA_SCHPO1.536e-4151.97Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATA_PROMI1.537e-4152.67Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_PICAN1.907e-4151.97Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
BCA_STRVL1.907e-4154.61Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATB_AJECA2.490e-4154.97Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATE_RHIME5.547e-4151.92Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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