CK939438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 88/272 (32.35%), Postives = 140/272 (51.47%), Query Frame = 1 Query: 70 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAK-LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVS 861 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M GH +++ G+ + +Y MG+ AE+ H I+R++QD++A+RS + A G F EI P++ G I D DE + + L L+P+F +GG+VTAG +S I+DGA+ ++++S Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIF-DYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMS 256
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 81/264 (30.68%), Postives = 137/264 (51.89%), Query Frame = 1 Query: 82 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVS 861 ++V IV RTPMG G A L + ++ LKR +V P ++++++G V G AR +AL AG+P S+ TT+N++C S M+A+ A+++I +G +I + GG+E M + P + H L + MG+ AE+ H I+R++QD++A+ S ++ A G F EI P+E G +++ + + L LRP+F G+VTAG++S +SDGA+A++++S Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRYTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP-----------MNHGVDFHSGLSKSVAKASG--MMGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPIEGHDENGVLTLVTHDEVIRPETTLEGLAALRPAFDPANGTVTAGSSSALSDGASAMLVMS 252
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 81/264 (30.68%), Postives = 137/264 (51.89%), Query Frame = 1 Query: 82 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVS 861 ++V IV RTPMG G A L + ++ LKR +V P ++++++G V G AR +AL AG+P S+ TT+N++C S M+A+ A+++I +G +I + GG+E M + P + H L + MG+ AE+ H I+R++QD++A+ S ++ A G F EI P+E G +++ + + L LRP+F G+VTAG++S +SDGA+A++++S Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP-----------MNHGVDFHSGLSKSVAKASG--MMGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPMEGHDENGALTLVTHDEVIRPETTLEGLAALRPAFDPANGTVTAGSSSALSDGASAMLVMS 252
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 82/263 (31.18%), Postives = 128/263 (48.67%), Query Frame = 1 Query: 82 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLV 858 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS +R AA G FA EI +E G ++ + + L LRP F G+VTAG +S +SDGA+A++++ Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSALSDGASAMLIM 251
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 87/270 (32.22%), Postives = 132/270 (48.89%), Query Frame = 1 Query: 70 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAK-LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSG 864 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS + A G F EI P++ G + D DE + + L L+P+F +GG+VTAG +S I+DGA+ ++++SG Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKVF-DFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSG 257
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 87/270 (32.22%), Postives = 132/270 (48.89%), Query Frame = 1 Query: 70 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAK-LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSG 864 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS + A G F EI P++ G + D DE + + L L+P+F +GG+VTAG +S I+DGA+ ++++SG Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKVF-DFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSG 257
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 88/270 (32.59%), Postives = 133/270 (49.26%), Query Frame = 1 Query: 70 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAK-LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSG 864 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS + A G F EI P++ G + D DE + + L L+P+F +GG+VTAG +S I+DGA+ +V++SG Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKVF-DFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMVVMSG 257
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.608e-23 Identity = 82/263 (31.18%), Postives = 128/263 (48.67%), Query Frame = 1 Query: 82 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLV 858 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS +R AA G FA EI +E G ++ + + L LRP F G+VTAG +S +SDGA+A++++ Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVM 251
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.608e-23 Identity = 82/263 (31.18%), Postives = 128/263 (48.67%), Query Frame = 1 Query: 82 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLV 858 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS +R AA G FA EI +E G ++ + + L LRP F G+VTAG +S +SDGA+A++++ Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVM 251
BLAST of CK939438 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.608e-23 Identity = 87/270 (32.22%), Postives = 133/270 (49.26%), Query Frame = 1 Query: 70 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPSIIVDKDEGLEKFDAAK-LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSG 864 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V + G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS + A G F EI P++ G + D DE + + L L+P+F +GG+VTAG +S I+DGA+ ++++SG Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKVF-DFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSG 257 The following BLAST results are available for this feature:
BLAST of CK939438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 268
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939438 ID=CK939438; Name=CK939438; organism=Citrus sinensis; type=EST; length=866bpback to top |