CN188195

Overview
NameCN188195
Unique NameCN188195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 230.72 bits (587), Expect = 6.960e-60
Identity = 119/193 (61.66%), Postives = 131/193 (67.88%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 785
            KKQSDVMRFL RVRCW+YRQ   + R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV Q+KF RS +S AEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H A+R DP   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R  TL L RYR
Sbjct:   13 KKQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 9.089e-60
Identity = 120/193 (62.18%), Postives = 133/193 (68.91%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 785
            KKQSDVMRFL RVRCW+YRQ  S+ R  +PTRPDKARRLGYKAKQ                    G  YGKP + GV Q+KF RS +S AEERAGR  GGL+VL+SYW+ EDSTYK+FEVILVD  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R  TL L RYR
Sbjct:   13 KKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.645e-59
Identity = 119/193 (61.66%), Postives = 132/193 (68.39%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWKRNQTLSLRRYR 785
            KKQSD +RFL RVRCWEYR  P   R + PTR DKARRLGYKA Q                    G   GKP   GV +LK  R+ RSVAEER GR+   L+VLNSYW+N+DSTYKY+EVILVD +HNAIRNDPR NWICKPVHKHRELRGLTSAG K RGLR KG H   K RPSR+A +KR  T+   RYR
Sbjct:   13 KKQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNTVVFHRYR 205          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.924e-58
Identity = 117/192 (60.94%), Postives = 133/192 (69.27%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 785
            KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    L+VLNSYW+N+D+TYK+FEVILVD +H AIR DPRINWI  PVHKHRE RGLTS GKK RG+ GKGH ++ +   + ATW R+ TLSLRRYR
Sbjct:   13 KKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRYNNS--PQHATWLRHNTLSLRRYR 201          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.514e-58
Identity = 117/192 (60.94%), Postives = 132/192 (68.75%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 785
            KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    L+VLNSYW+N+D+TYK+FEVILVD +H AIR DPRINWI  PVHKHRE RGLTS GKK RG+ GKGH  + +   + ATW R+ TLSLRRYR
Sbjct:   13 KKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRFNNS--PQHATWLRHNTLSLRRYR 201          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 1.451e-57
Identity = 115/193 (59.59%), Postives = 133/193 (68.91%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNQTLSLRRYR 785
            KKQSDVMR+L R+R W+YRQ     R  RP+RPDKARRLGYKAKQ                    G  YGKP + GV QLK  R  +SVAEER GR+LGGL+VLNSYW+ +D+ +KYFEVI+VD AHNAIR DP +NWIC  VHKHRELRGLTSAGK  RGL GKG+ + +    SRRA W+R   L LRRYR
Sbjct:   13 KKQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL-GKGYRYSQTIGGSRRACWRRRNRLHLRRYR 204          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 3.233e-57
Identity = 110/193 (56.99%), Postives = 135/193 (69.95%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNQTLSLRRYR 785
            KKQSDV+R+L RVRCW+YRQ   + R  RP+RPDKARRLGYKAKQ                    G  YGKP + GV QLK  R+ +SVAEER GR++GGL+VLNSYW+ +D+ +KY+EVI VD  HNA+R DP++NW+C  VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA W+R   L LRRYR
Sbjct:   13 KKQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV-GKGYRYSQTIGGSRRAAWRRKNRLHLRRYR 204          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.963e-56
Identity = 112/193 (58.03%), Postives = 133/193 (68.91%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNQTLSLRRYR 785
            KKQSDVMR+L R+R W+YRQ   + R  RPTRPDKARRLGY+AKQ                    G  YGKP + GV QLK  R  +S+AEER GR+LGGL+VLNSYWI +D++YKYFEVIL+D  H+AIR DP+INWICK VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA WKR     + R R
Sbjct:   13 KKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI-GKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.502e-54
Identity = 109/192 (56.77%), Postives = 127/192 (66.15%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 785
            KKQSDVMRFL R+R W+YR    + R  RPTRP+KARRLGYKAKQ                    G  YGKP + GV QLK  R+ +S+AEER GR+LGGL+VLNSYW+ +DSTYKYFEVILVD  HN IR    +NWICK   KHRE+RG TSAG+K+RGL    H       SRR+ W R+ TLSLRR R
Sbjct:   13 KKQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGLGRGFHYSQTKGGSRRSCWLRHNTLSLRRKR 204          
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.828e-50
Identity = 104/193 (53.89%), Postives = 125/193 (64.77%), Query Frame = -3
Query:  210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA-TWKRNQTLSLRRYR 785
            KKQSD +R+L R+R W YRQ  ++ RV RPTRP+KARRLGY+AKQ                    G  YGKP   GV +LK  +SK++VAE RAGR+LG L+VLNSYW+ EDSTYK++EV+L+D  H AIR +P   WI KPVHKHRE RGLTSAG+K RGL GKG      R   +A  WKR  T    R R
Sbjct:   13 KKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGL-GKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204          
The following BLAST results are available for this feature:
BLAST of CN188195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL15_ANGJA6.960e-6061.6660S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_PARDA9.089e-6062.1860S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_DICDI2.645e-5961.6660S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15B_SCHPO2.924e-5860.9460S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO6.514e-5860.9460S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_ANOGA1.451e-5759.5960S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15_CHITE3.233e-5756.9960S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_DROME7.963e-5658.0360S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_ORCLI1.502e-5456.7760S ribosomal protein L15 OS=Orconectes limosus GN... [more]
RL15_CAEEL3.828e-5053.8960S ribosomal protein L15 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188195 ID=CN188195; Name=CN188195; organism=Citrus sinensis; type=EST; length=787bp
GGGGGGAAGGCAGGGCCCCCTTTTTATAGAGGTATTCATCTGGATAAAAC
AATCCATAGGAATTACAATATTCAATTGCCCAAATGAAACAAAATTAACC
ATGATGCAGCAAAAACTAACCCAAAACACTTGTTTCGGAGTTCAAACTCA
ACAGCAATTAAACTAGGTTGATAATGTGAAAAACACAAAGTAAACAATAC
AGAAGTTTAACGGTAACGCCTGAGCGAGAGAGTTTGGTTCCTCTTCCAGG
TTGCCCTTCTTGAAGGTCGTGCCTTGTGGTGCAAGTGACCCTTTCCTCGG
AGACCTCTGTACTTCTTCCCAGCAGAAGTGAGTCCACGAAGCTCCCTGTG
CTTGTGGACAGGCTTACAGATCCAGTTGATCCTGGGGTCATTGCGGATTG
CATTGTGGGCAGCATCCACCAGGATTACCTCAAAGTACTTGTAAGTTGAA
TCCTCATTGATCCAGTATGAGTTGAGAACCTTAAGGCCACCAAGCTTACG
ACCGGCACGTTCCTCAGCAACTGAACGCTTGCTGCGCTGGAATTTAAGCT
GAGTGACACCCTGGTTTGTCGGTTTACCATATACAATACCCTTGGGAACT
GGTCTCTTTCGTCCTCCACGTCTTACACGCACACGATAAACGACATAACC
CTGCTTGGCCTTGTAGCCCAAGCGGCGAGCCTTGTCGGGGCGAGTGGGAC
GGGTGACGCGGACGATGGAAGGGTGCTGACGGTACTCCCAGCACCTCACC
CTCTGCAAGAACCTCATCACATCCGACTGCTTCTTCC
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