CN188195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.529e-50 Identity = 102/165 (61.82%), Postives = 112/165 (67.88%), Query Frame = -3 Query: 210 RPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 701 RPTRPDKARRLGYKAKQ G YGKP + GV QLKF RS +SVAEERAGR G L+VLNSYW+ EDSTYK+FEVIL+D H IR +P WI KPVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R TL L RYR Sbjct: 2 RPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 165
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.470e-43 Identity = 91/154 (59.09%), Postives = 101/154 (65.58%), Query Frame = -3 Query: 210 GYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 668 GYKAKQ G YGKP + GV QLKF RS +SV EERAGR G L+VLNSYW+ EDSTYK+FEVIL+D H AIR +P WI KPVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R TL L RYR Sbjct: 1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 153
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.322e-34 Identity = 88/192 (45.83%), Postives = 104/192 (54.17%), Query Frame = -3 Query: 210 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 785 +KQSDV+RFL RVRCWEYRQ I R +RP+RPDKARRLGYKAKQ G +GKP NQG+ QLKFQRS RS AEER R+ GGL++LNSYWI + + + L + P P L GK+ RGL G+G H K+ A WKR L LRRYR Sbjct: 13 RKQSDVLRFLLRVRCWEYRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITKTVSTSTLKSSLSTPSTRLSVVMPVSTGSATPYTSAENLAVSHPLGKQNRGL-GRGSKHTKS--PNHAFWKRTNKLFLRRYR 201
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.254e-34 Identity = 81/183 (44.26%), Postives = 108/183 (59.02%), Query Frame = -3 Query: 234 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 782 K+S V + L R ++R+ P++VR+ RPTR D+AR LGYK KQ KP GV ++ +S + +AEERA RK ++VLNSYW+ ED +K++EVILVD H AI+ DP++NW+C H+ R RGLTSAGKK RGLR KG K RPS RA +R + Sbjct: 15 KESYVRQLLWE-RLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK--KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRRGK 194
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.944e-34 Identity = 78/173 (45.09%), Postives = 103/173 (59.54%), Query Frame = -3 Query: 240 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 758 LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L+VLNSYW+ +D K++EVILVD+ H +I++D NW+CK HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 22 LQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRANSKK 192
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.944e-34 Identity = 78/173 (45.09%), Postives = 103/173 (59.54%), Query Frame = -3 Query: 240 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 758 LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L+VLNSYW+ +D K++EVILVD+ H +I++D NW+CK HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 22 LQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRANSKK 192
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.944e-34 Identity = 77/175 (44.00%), Postives = 102/175 (58.29%), Query Frame = -3 Query: 234 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 758 LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA +K ++VLNSYW+ +D K++EVILVD +I+ND NW+CK HK R RGLTSAGKK RGL KG KARPS RA K+ + Sbjct: 22 LQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGAEKARPSVRANGKKTK 194
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_THEON (50S ribosomal protein L15e OS=Thermococcus onnurineus (strain NA1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.252e-33 Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 782 K+S V + L++ R ++R+ P +VRV RPTR D+AR LGY+AKQ G KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAG+K RGLR KG K RPS RA Sbjct: 15 KKSYVGQLLKK-RMIKWRREPVVVRVERPTRLDRARSLGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGRKSRGLRNKGKGAEKVRPSVRA 188
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_THEGJ (50S ribosomal protein L15e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.472e-33 Identity = 81/177 (45.76%), Postives = 106/177 (59.89%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 782 K+S V L++ R ++R+ P +VR+ RPTR D+AR LGY+AKQ G KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 15 KKSYVGELLKK-RMIKWRREPVVVRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWITGKAHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSVRA 188
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 9.472e-33 Identity = 82/177 (46.33%), Postives = 107/177 (60.45%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 782 K+S V + L++ R ++R+ PS+VR+ RPTR D+AR LGY+AKQ G KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 15 KKSYVGQLLKQ-RMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188 The following BLAST results are available for this feature:
BLAST of CN188195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188195 ID=CN188195; Name=CN188195; organism=Citrus sinensis; type=EST; length=787bpback to top |