CN188195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAB (50S ribosomal protein L15e OS=Pyrococcus abyssi GN=rpl15e PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.110e-32 Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 782 K+S V + L++ R ++R+ P++VR+ RPTR D+AR LGY+AKQ G KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 15 KKSYVGQLLKQ-RMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.701e-32 Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3 Query: 252 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 758 L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ G KP+ G + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 22 LLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSIRA 188
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.368e-31 Identity = 80/186 (43.01%), Postives = 103/186 (55.38%), Query Frame = -3 Query: 210 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 767 M L R R ++R+ P+I+R+ +PTR D+AR LGYKAKQ +P G+ +S R +AEERA RK L+VLNSY++ ED YK++EVILVD H AI NDP I WIC+ H+ R RGLTSAGKK RGLR L + + + WKR Q L + R Sbjct: 21 MLTLMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPNK--GRRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLRKSRGLKY----TIKYKWKRKQKERLLKKR 200
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.368e-31 Identity = 82/186 (44.09%), Postives = 107/186 (57.53%), Query Frame = -3 Query: 240 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRG----KGHLHHKARPSRRATWKR 785 K++S + L R R E+R+ PS+VR+ +PTR DKAR LGYKAK +P GV +S R +AEERA RK GL+VLNSY++ ED YK++EVILVD H +I NDP +NWIC+P ++ R RGLTSAGKK RGLR +G +++K WKR Sbjct: 14 KEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLRGTVYYK--------WKR 189
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_PYRKO (50S ribosomal protein L15e OS=Pyrococcus kodakaraensis GN=rpl15e PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.979e-31 Identity = 78/177 (44.07%), Postives = 104/177 (58.76%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 782 K+S V L++ R ++R+ P + R+ RPTR D+AR LGY+AKQ G KP+ G+ + ++S + +AEE+A RK L+VLNSYW+ ED YK+FEVI+VD H I++DP+I WI HK R RGLTSAGK+ RGL KG K RPS RA Sbjct: 15 KKSYVGELLKK-RMIQWRRDPVVKRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGKRSRGLLNKGKGAEKVRPSIRA 188
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.979e-31 Identity = 76/175 (43.43%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 234 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 758 L + R ++R+ PS+ R+ RPTR ++ARRLGY+AK +P G + +SK+ +AEERA RK L+VLNSYW+ ED YKY+EVI+VD H I++D RINWIC+ K R RG T AGKK RGLR +G K RPS RA +R + Sbjct: 25 LLKERLPKWRKGPSVQRIKRPTRIERARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSDHRINWICQKSQKGRVFRGKTGAGKKARGLRKRGKGAEKVRPSLRAHRRRGK 197
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.788e-31 Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 234 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 758 LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA ++ ++VLNSYW+ +D K++E+ILVD H +I+ND +W+ HK R RGLTSAGKK RGL KG KARP RA K+ + Sbjct: 22 LQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRANGKKTK 194
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_AERPE (50S ribosomal protein L15e OS=Aeropyrum pernix GN=rpl15e PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.158e-30 Identity = 79/183 (43.17%), Postives = 100/183 (54.64%), Query Frame = -3 Query: 210 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 758 L + R E+R+ PSI+RV +PTR D+AR LGYKAKQ +P GV +S R +AEERA RK L VLNSY++ ED YK++EVILVD H AI+NDP +NW+ HK R RGLTSAGKK RGLR L + + + WK+ + R R Sbjct: 24 LMKARLLEWRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNK--GRRPKRMGVYGFAPAKSLRLIAEERAQRKYPNLVVLNSYYVGEDGRYKWYEVILVDPNHPAIKNDPELNWVTTGKHKGRPFRGLTSAGKKMRGLRKSRGL----KGTHKYKWKKKAKERILRKR 200
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METHJ (50S ribosomal protein L15e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl15e PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30 Identity = 78/170 (45.88%), Postives = 98/170 (57.65%), Query Frame = -3 Query: 240 RCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPT-NQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 746 R ++R+ SIVRV RPTR D+AR LGYKAKQ V G+ T GV + +S + +AEERA RK ++VLNSYW+ ED K++EVIL+D H +I ND +NWI KP H+ R RGLTSAG K RG+R +G K RPS RA R Sbjct: 28 RMQDWRREGSIVRVRRPTRIDRARALGYKAKQGIVVVRVKVRRGGRRASRY---VRGRRTARMGVNRKTMGKSIQRIAEERACRKYPNMEVLNSYWVGEDGRQKWYEVILLDPHHPSIINDKTLNWISKPGHRGRSERGLTSAGVKGRGMRRRGKGTEKCRPSVRANANR 194
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_HALSA (50S ribosomal protein L15e OS=Halobacterium salinarium GN=rpl15e PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = -3 Query: 231 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQT 758 LQ R ++R+ +I RV RPTR DKAR LGYKAKQ G+ T QGV ++ ++ + +AEERA RK L+ LNSYW+ ED + K+FE IL+D H AI+ND +NWIC HK+R RG TSAG++ RGL+ +G RPS A KRN++ Sbjct: 24 LQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196 The following BLAST results are available for this feature:
BLAST of CN188195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188195 ID=CN188195; Name=CN188195; organism=Citrus sinensis; type=EST; length=787bpback to top |