CN188195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_HALS3 (50S ribosomal protein L15e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = -3 Query: 231 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQT 758 LQ R ++R+ +I RV RPTR DKAR LGYKAKQ G+ T QGV ++ ++ + +AEERA RK L+ LNSYW+ ED + K+FE IL+D H AI+ND +NWIC HK+R RG TSAG++ RGL+ +G RPS A KRN++ Sbjct: 24 LQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 2.184e-29 Identity = 72/167 (43.11%), Postives = 94/167 (56.29%), Query Frame = -3 Query: 267 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 767 +R L R ++R+ P I R+ RPTR D+AR LGY+AK +PT GV ++ +S + +AEER RK ++VLNSYW+ ED YK++EVILVD H AI+NDP+I WIC H+ R RGL S GKK RGLR +G K R Sbjct: 18 VRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFK--AGRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRGKGAEKVR 182
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_NATPD (50S ribosomal protein L15e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.865e-29 Identity = 74/175 (42.29%), Postives = 99/175 (56.57%), Query Frame = -3 Query: 234 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 758 LQ R E+R +I R+ RPTR DKAR LGYKAKQ K QGV ++ +++ + +AEER+GRK L+VLNSYW+ ED + K+FEVIL+D H AI+ND ++WIC + R RG TSAG++ RG + +G RPS RA KR + Sbjct: 24 LQWQRQQEWRDQGAIERIERPTRLDKARSLGYKAKQGVVVARVSVRKGTARKQRFKAGRRSK--RQGVNKITRRKNLQRIAEERSGRKFRNLRVLNSYWVGEDGSQKWFEVILLDPEHGAIQNDDDLSWICDDSQRGRAYRGRTSAGQRGRGQQKRGKGTEHTRPSIRANDKRGK 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_HALWD (50S ribosomal protein L15e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.865e-29 Identity = 74/175 (42.29%), Postives = 95/175 (54.29%), Query Frame = -3 Query: 234 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 758 LQ R E+R +IVR+ RPTR DKAR LGYKAKQ K QGV +L + S + +AEERA RK L+ L SYW+ ED + K+ E+IL+D H AI ND +NWIC HK R RGLT+AG+ RGL+ +G RPS + +R + Sbjct: 24 LQWQRKQEWRDQGAIVRIDRPTRLDKARELGYKAKQGVIIARVAVRKGGARKKRFTSGRRSK--RQGVNRLGRRTSIQRIAEERAARKYPNLRTLASYWVGEDGSQKWHEIILIDPEHAAIENDDDLNWICDDTHKGRAFRGLTNAGRSNRGLQNRGKGAEHTRPSAGSGSRRGK 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_ARCFU (50S ribosomal protein L15e OS=Archaeoglobus fulgidus GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.298e-29 Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = -3 Query: 234 RCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 746 R ++R+ P++VR+ RPTR D+AR LGYKAK+ K V + +++ + +AEERA RK ++VLNSYW+ ED YK+FEVILVD H AI++DP+++W+ + + R RGLTSAG+K RGLR KG K RPS RA +++ + Sbjct: 27 RLQKWRREPAVVRIPRPTRLDRARALGYKAKKGIIVVRVRIRRGGRRATRPNK--GRKSKGLMVNRRTPKKNLQWIAEERANRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSRT--RGRVYRGLTSAGRKARGLRRKGRGAEKVRPSLRANFRKKR 193
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.084e-28 Identity = 73/165 (44.24%), Postives = 94/165 (56.97%), Query Frame = -3 Query: 267 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 758 L R R ++R+ P I+R+ +PTR D+ARRLGYKAK G+ P GV ++ ++S + +AEER RK L+VLNSYW+ ED KY+EVILVD +I++D +INWIC H R RGLTSAGKK RGL KG K R Sbjct: 25 LMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGKGAEKVR 186
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METBU (50S ribosomal protein L15e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl15e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.849e-28 Identity = 70/175 (40.00%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 234 QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 755 +R++ W R+ S+ RV RPTR D+AR LGYKAKQ + G+ T G ++ +S + ++EERA RK ++VLNSYW+ ED K++EVILVD +H I++D +NWIC H R RG TSAG+K RG++ +G K RPS R+ R++ Sbjct: 27 ERLQVW--RKEGSVTRVERPTRIDRARSLGYKAKQGIVVARVKVRRGSMRKSRY---IRGRRTQHTGKNKITVGKSIQRISEERAARKYPNMEVLNSYWVGEDGKQKWYEVILVDPSHPVIKSDKNLNWICGKAHSGRVFRGKTSAGRKGRGMQTRGTGTEKTRPSVRSNLNRSK 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_HALLT (50S ribosomal protein L15e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl15e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.849e-28 Identity = 76/166 (45.78%), Postives = 91/166 (54.82%), Query Frame = -3 Query: 261 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 758 LQ R E+R +I R+ RPTR DKAR LGYKAKQ K QGV +L ++S + ++EERA RK L+VLNSYW+ ED + K+ EVILVD H AI ND + WI HK R RGLTSAG K RG R +G K RPS Sbjct: 24 LQWQRKQEWRDEGAIERIERPTRLDKARELGYKAKQGVVVARVSVRKGGSRKQRHKAGRRSK--RQGVNRLSRRKSIQRISEERASRKYRNLRVLNSYWVGEDGSQKWHEVILVDPNHPAIENDGDLGWIASDDHKGRAFRGLTSAGTKGRGQRTRGTGTEKTRPS 187
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.174e-28 Identity = 71/181 (39.23%), Postives = 97/181 (53.59%), Query Frame = -3 Query: 243 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 785 K ++ LQ R ++R+ P++VRV +PTR D+AR LGYKAKQ KP + ++ +S + +AEERA ++ L+VLNSY + ED K++EVIL+D H +I+ND +C H +R RGLTSAGKK RGL KG K RP RA K Sbjct: 13 KPSESYVKGLQWARMQDWRKEPTVVRVEKPTRIDRARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGLMNKGKGAEKVRPGIRANKK 191
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_THEAC (50S ribosomal protein L15e OS=Thermoplasma acidophilum GN=rpl15e PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.565e-27 Identity = 75/178 (42.13%), Postives = 103/178 (57.87%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 782 K+S++ +++ R E+R PSIVR+ PTR D+AR LG+K+K I+ G+ P +L ++S + +AEERA K ++VLNSY++ ED YKYFEVILVD +H I NDP I+WI +P + R RGLTSAG K RGLR K+RPS R+ Sbjct: 18 KKSEIYDLVKK-RMIEWRHGPSIVRLEHPTRIDRARALGFKSKDGFIVVRSRVRRGGSNREK---IMGGRRPRRMAYNKLTRKKSLKLIAEERAADKYPNMEVLNSYYVGEDGLYKYFEVILVDRSHPNIFNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRS 191 The following BLAST results are available for this feature:
BLAST of CN188195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188195 ID=CN188195; Name=CN188195; organism=Citrus sinensis; type=EST; length=787bpback to top |