CN188195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.947e-27 Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = -3 Query: 234 RCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 746 R E+R+ P++V++ RPTR D+AR LGYKAKQ K + G+ L + S + +AE RA RK ++VLNSYW+ +D +K++E+ILVD H +I +D ++WI K H+ R RGLTSAGKK RG R KG K PS +A +R + Sbjct: 28 RLQEWRKEPTVVKIDRPTRLDRARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEIILVDPHHPSIASDKNLSWITKGTHRGRAERGLTSAGKKGRGQRRKGKGTEKNYPSVQAHDRRGK 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_SULSO (50S ribosomal protein L15e OS=Sulfolobus solfataricus GN=rpl15e PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.766e-27 Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = -3 Query: 234 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 752 R R ++R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + R +AEERA RK L+VL SY++ ED YKY+E+++VD +H I++DP+ W+ P +++R RGLTSAGKK RGLR L + + R W R Q Sbjct: 24 RQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLRKSRGL----KGTVRYKWNRKQ 190
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METAC (50S ribosomal protein L15e OS=Methanosarcina acetivorans GN=rpl15e PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.766e-27 Identity = 70/175 (40.00%), Postives = 97/175 (55.43%), Query Frame = -3 Query: 234 QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 755 +R++ W R+ S+ R+ RPTR D+AR LGYKAKQ G+ T + G ++ S + +AE RA R+ L+VLNSYW+ ED +K+FEVILVD H I++D +NW+C P + R RG TSAG+K RG+ +G K RPS RA R + Sbjct: 27 ERLQVW--RKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRKGRGMATRGKGTEKTRPSIRAYKSRGK 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METS5 (50S ribosomal protein L15e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl15e PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26 Identity = 70/185 (37.84%), Postives = 102/185 (55.14%), Query Frame = -3 Query: 210 RVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHKARPSRRATWKRNQTLSLRRYR 752 R R E+R ++ R+ +PTR D+AR LGYKAKQ +P GV +S + +AEE+A RK GL+VL SY++ ED YKY+EVILVD + I +DP+ NW+ P ++ R RGLTSAG++ RGL RG KG +H+K ++ ++ + + + YR Sbjct: 24 RQRLVEWRNQNTVTRIEKPTRLDRARALGYKAKQGIIVARVKVEKGGMDKQRPNS--GRRPKRMGVYGFSPAKSLQFIAEEKAARKFPGLEVLGSYYVAEDGKYKYYEVILVDPHNPVIMSDPQFNWLKNPANRGRVFRGLTSAGRRTRGLLKSRGLKGTIHYKIARKKKEREQKKRHEASKYYR 206
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METMA (50S ribosomal protein L15e OS=Methanosarcina mazei GN=rpl15e PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.951e-26 Identity = 71/175 (40.57%), Postives = 96/175 (54.86%), Query Frame = -3 Query: 234 QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQ 755 +R++ W R+ S+ R+ RPTR D+AR LGYKAKQ G+ T + G ++ S + +AE RA RK L+VLNSYW+ ED +K+FEVILVD H I++D +NWIC + R RG TSAG+K RG+ +G K RPS RA R + Sbjct: 27 ERLQVW--RKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEARADRKYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWICDASIRGRATRGKTSAGRKGRGMSTRGKGTEKTRPSIRAHKSRGK 196
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_HALMA (50S ribosomal protein L15e OS=Haloarcula marismortui GN=rpl15e PE=1 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 3.854e-26 Identity = 71/169 (42.01%), Postives = 91/169 (53.85%), Query Frame = -3 Query: 252 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 758 LQ R E+R ++ R+ RPTR DKAR GYKAKQ K QGVT++ ++ + VAEERA R L+VLNSY + +D K+ EVIL+D H AI+ND ++WIC R RGLT AG++ RGL GKG K RPS R+ Sbjct: 24 LQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSK--RQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRS 190
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METB6 (50S ribosomal protein L15e OS=Methanoregula boonei (strain 6A8) GN=rpl15e PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25 Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = -3 Query: 252 QSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 779 +SDV L R++ W R+ S+ R+ RPTR D+AR LGYKAKQ + + G +S + +AEERA + ++VLNSYW+ +D KY+EVILVD H +I++D + W+ P H+ R RG TSAG+K RG+R +G K RPS R+ Sbjct: 18 KSDVKALLWDRMQVW--RREGSVTRIDRPTRIDRARALGYKAKQGIAVVRVHVRRGGRRASRY--VRARRSARMGKNSSTPGKSIQRIAEERASVRYPNMEVLNSYWVGQDGKLKYYEVILVDGHHPSIQSDKNLAWLANPTHRGRAERGKTSAGRKGRGMRTRGRGTEKTRPSIRS 190
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_PICTO (50S ribosomal protein L15e OS=Picrophilus torridus GN=rpl15e PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.263e-25 Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = -3 Query: 252 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHL-HHKARPSRRA 782 K+SD+ +Q+ R +R+ S+VR+ PTR D+AR LGYKAKQ I+ G+ P +L ++S + +AEERA K ++VLNSY++ ED YKY+EVIL+D + A+ +D ++WI +K R RGLTSAG K RGL G G L K+RPS RA Sbjct: 16 KKSDIYP-VQKARMVSWRKSGSVVRLDYPTRLDRARSLGYKAKQGFIIVRSRVRKGGQHRPK---IMGGRRPRRLAYNKLTVKKSIQLIAEERAADKYPNMEVLNSYYVGEDGLYKYYEVILIDRSSPAVLSDKNVSWIANSANKGRVYRGLTSAGYKSRGL-GHGRLGSAKSRPSIRA 189
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_METLZ (50S ribosomal protein L15e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl15e PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.676e-21 Identity = 64/175 (36.57%), Postives = 97/175 (55.43%), Query Frame = -3 Query: 261 QSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 779 +S V + L +R++ W R+ ++VR+ RPTR D+AR LGYKAKQ + G+ TN+ G+ + ++ +S+AEERA + ++VLNSYW+ +D KY+EVILVD ++ D + W+ + R RG TSAG++ RGL +G K RPS Sbjct: 18 ESGVKKLLWERMQTW--RRQGAVVRLERPTRIDRARELGYKAKQGIIVVRASIRRGGRRKSRY---IRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADT--RGRVFRGKTSAGRRARGLHNRGTGTEKCRPS 185
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_NANEQ (50S ribosomal protein L15e OS=Nanoarchaeum equitans GN=rpl15e PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.368e-21 Identity = 64/173 (36.99%), Postives = 87/173 (50.29%), Query Frame = -3 Query: 243 FLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 761 + QR++ W R+ P IV V RPTR D+AR LGYK I G+ + + +AEERA R ++VL SYW+ ED YK++EVILVD + I N P W+ + + R RG TS+ +K+RGLR G K RPS+RA +K Sbjct: 22 YKQRIQQW--RREPPIVEVERPTRIDRARALGYKP---LPGIKIVRVRVRKGTRKREEIKGGRRPKAEYRIRPLGVNLQWIAEERANRLHRNMEVLGSYWVGEDGLYKWYEVILVDPFNPNIYNRPEYVWLLQKNQRGRVFRGKTSSARKFRGLRNGGLGAEKVRPSKRANFK 189 The following BLAST results are available for this feature:
BLAST of CN188195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188195 ID=CN188195; Name=CN188195; organism=Citrus sinensis; type=EST; length=787bpback to top |