CN188195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAE (50S ribosomal protein L15e OS=Pyrobaculum aerophilum GN=rpl15e PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20 Identity = 63/155 (40.65%), Postives = 83/155 (53.55%), Query Frame = -3 Query: 312 DVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWIC-KPVHKHRELRGLTSAGKK 773 +V L R E+R+ P+IVRV RP R ++AR+LGYKAKQ +P GV + +S R VAEERA RK L+VLNSYW+ +D Y+YFEVIL+D I+NDP + IC + V + R +R L KK Sbjct: 19 EVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQGVVVVRVRLMRGPFNRRRPDS--GRRPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTIKNDPLYSGICGREVPRRRIIRRLRERQKK 171
BLAST of CN188195 vs. ExPASy Swiss-Prot
Match: RL15_BRANA (60S ribosomal protein L15 (Fragment) OS=Brassica napus GN=RPL15 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.875e-14 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = -3 Query: 651 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQ 767 MRF+QRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ Sbjct: 3 MRFVQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQ 41 HSP 2 Score: 21.1718 bits (43), Expect = 1.875e-14 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = -1 Query: 560 PRVLYMVNRQTR 595 P+VL MVN QTR Sbjct: 60 PKVLCMVNPQTR 71 The following BLAST results are available for this feature:
BLAST of CN188195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188195 ID=CN188195; Name=CN188195; organism=Citrus sinensis; type=EST; length=787bpback to top |