CK939424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_CYAPA (Photosystem II reaction center protein H OS=Cyanophora paradoxa GN=psbH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 3 Query: 51 PKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 P+RT+ G +L+PLNSEYGKVAPGWGTTPLM V M LF VFL II++IYNSS+LL+ + ++ Sbjct: 2 PQRTALGNILRPLNSEYGKVAPGWGTTPLMAVFMLLFFVFLLIIIQIYNSSLLLENVQVS 61
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_CYAP8 (Photosystem II reaction center protein H OS=Cyanothece sp. (strain PCC 8801) GN=psbH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 3 Query: 54 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISL 227 +RT G LL+PLNSEYGKV PGWGTTPLMGV M LF VFL IIL+IYNSS++L+G ++ Sbjct: 3 QRTGLGDLLRPLNSEYGKVVPGWGTTPLMGVFMGLFLVFLLIILQIYNSSLILEGFTV 60
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_STIHE (Photosystem II reaction center protein H OS=Stigeoclonium helveticum GN=psbH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17 Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 60 TSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 T G LLKPLNSE GKV PGWGTT LMGV MALFAVFL I+LEIYNSSV+LDG++++ Sbjct: 21 TPLGRLLKPLNSEAGKVLPGWGTTVLMGVFMALFAVFLVILLEIYNSSVILDGVTMS 77
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_OLTVI (Photosystem II reaction center protein H OS=Oltmannsiellopsis viridis GN=psbH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17 Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 60 TSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 T+ G LL+PLNSEYGKVAPGWGTT LMG MALFAVFL IILEIYNSSVLL+ + ++ Sbjct: 14 TALGTLLRPLNSEYGKVAPGWGTTVLMGTFMALFAVFLVIILEIYNSSVLLEDVPMS 70
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_CYAA5 (Photosystem II reaction center protein H OS=Cyanothece sp. (strain ATCC 51142) GN=psbH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17 Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 3 Query: 54 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISL 227 +RT G LL+PLNSEYGKV PGWGTTPLMGV M LF VFL IIL+IYNSS++L+G ++ Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPLMGVFMGLFLVFLLIILQIYNSSLILNGFTV 60
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_SYNJA (Photosystem II reaction center protein H OS=Synechococcus sp. (strain JA-3-3Ab) GN=psbH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.823e-16 Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 57 RTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 RT G LL+PLNSEYGKVAPGWGTTPLM V M LF +FL IIL+IYN S+LL+ I+++ Sbjct: 4 RTKLGDLLRPLNSEYGKVAPGWGTTPLMAVFMVLFGIFLLIILQIYNKSLLLEDINVS 61
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_MICAN (Photosystem II reaction center protein H OS=Microcystis aeruginosa (strain NIES-843) GN=psbH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.381e-16 Identity = 40/59 (67.80%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 54 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 +RT G +L+PLNSEYGKV+PGWGTT LMGV MALF VFL IIL+IYNSS++L+G +++ Sbjct: 3 QRTRLGEILRPLNSEYGKVSPGWGTTLLMGVFMALFLVFLLIILQIYNSSLILEGFNVD 61
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_EMIHU (Photosystem II reaction center protein H OS=Emiliania huxleyi GN=psbH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.381e-16 Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = 3 Query: 57 RTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 RT G +L+PLN+EYGKVAPGWGTTP+MGV M LF VFL IIL+IYNSS++L+ + ++ Sbjct: 4 RTRLGEILRPLNAEYGKVAPGWGTTPVMGVFMGLFLVFLVIILQIYNSSIILENVDVD 61
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_SYNP6 (Photosystem II reaction center protein H OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.110e-16 Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 3 Query: 54 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLD 215 +RT G +L+PLNSEYGKVAPGWGTTP+MGV M LF VFL IIL+IYNSS++LD Sbjct: 3 QRTRLGDILRPLNSEYGKVAPGWGTTPVMGVFMLLFFVFLLIILQIYNSSLVLD 56
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_SYNE7 (Photosystem II reaction center protein H OS=Synechococcus elongatus (strain PCC 7942) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.110e-16 Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 3 Query: 54 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLD 215 +RT G +L+PLNSEYGKVAPGWGTTP+MGV M LF VFL IIL+IYNSS++LD Sbjct: 3 QRTRLGDILRPLNSEYGKVAPGWGTTPVMGVFMLLFFVFLLIILQIYNSSLVLD 56 The following BLAST results are available for this feature:
BLAST of CK939424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939424 ID=CK939424; Name=CK939424; organism=Citrus sinensis; type=EST; length=839bpback to top |