CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB1_CLOTE (V-type ATP synthase beta chain 1 OS=Clostridium tetani GN=atpB1 PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.025e-85 Identity = 155/246 (63.01%), Postives = 192/246 (78.05%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G+P D GP I+PE LDI+G INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH ++AAQI RQA ++ + FA+VFAA+G+ E A+FF DF + G+++R LF+NLANDP IERI TPR+ALTTAEYLA+E G HVLVILTD+++Y +ALREVSAAR+EVPGRRGYPGY+YTDLA +YERAGRI+G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGLGRPKDEGPRIIPEKRLDINGIPINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHAQLAAQIARQAKVLN------------SDSKFAVVFAAVGITFEEAEFFVDDFTKTGAIDRSVLFMNLANDPAIERIATPRMALTTAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYTDLATLYERAGRIKGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB1_METHJ (V-type ATP synthase beta chain 1 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB1 PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 3.453e-85 Identity = 153/250 (61.20%), Postives = 191/250 (76.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV DMLGRI +G+GKP D GP I+PE L+I+G++INP R P + IQTGISTID+ N++ RGQK+P+FS +GLPHNEIA QI RQA + G ++ FA+VFAAMG+ E F +FE G++E +FLNLA+DP +ERIITPR+ALTTAEYLA+E HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA +YERAG I+G+KGS+TQ+ ILTMP DDITHP Sbjct: 75 IKMPVGKDMLGRILSGAGKPKDGGPDIVPEKRLEITGAAINPWARGSPRQFIQTGISTIDLTNTLVRGQKLPIFSGSGLPHNEIALQIARQAKV------------PGSDEQFAVVFAAMGITKEEENQFMAEFERTGALEHAVVFLNLADDPAVERIITPRLALTTAEYLAFELDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASLYERAGIIKGKKGSVTQLSILTMPGDDITHP 312
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOBB (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=atpB PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.510e-85 Identity = 152/246 (61.79%), Postives = 194/246 (78.86%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G+P DNGP I+PE +DI+G +INP R +P E IQTG+S ID +N++ RGQK+P+FSAAGLPH E+AAQI RQA ++ + FAIVFAA+G+ E AQFF+ +F+ G+++R LF+NLA+DP IERI TPR+ALT AEYLAYE G VLVI+TD+++YA+ALRE+SAAR+EVPGRRGYPGY+YTDL+ +YERAGR+ G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGMGRPNDNGPDIIPEKRVDINGEAINPMARDFPSEFIQTGVSAIDGLNTLVRGQKLPVFSAAGLPHAELAAQIARQAKVLN------------SDSKFAIVFAAIGITFEEAQFFQDEFKRTGAIDRSVLFMNLASDPAIERIATPRMALTCAEYLAYEKGMQVLVIMTDITNYAEALREISAARKEVPGRRGYPGYLYTDLSTLYERAGRLRGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOBA (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=atpB PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.510e-85 Identity = 152/246 (61.79%), Postives = 194/246 (78.86%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G+P DNGP I+PE +DI+G +INP R +P E IQTG+S ID +N++ RGQK+P+FSAAGLPH E+AAQI RQA ++ + FAIVFAA+G+ E AQFF+ +F+ G+++R LF+NLA+DP IERI TPR+ALT AEYLAYE G VLVI+TD+++YA+ALRE+SAAR+EVPGRRGYPGY+YTDL+ +YERAGR+ G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGMGRPNDNGPDIIPEKRVDINGEAINPMARDFPSEFIQTGVSAIDGLNTLVRGQKLPVFSAAGLPHAELAAQIARQAKVLN------------SDSKFAIVFAAIGITFEEAQFFQDEFKRTGAIDRSVLFMNLASDPAIERIATPRMALTCAEYLAYEKGMQVLVIMTDITNYAEALREISAARKEVPGRRGYPGYLYTDLSTLYERAGRLRGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CENSY (V-type ATP synthase beta chain OS=Cenarchaeum symbiosum GN=atpB PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.510e-85 Identity = 149/250 (59.60%), Postives = 199/250 (79.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 ++ PVS ++LGRIF+G G+P D P + + ++DI+G ++NP +R YP++ IQTG+S ID + ++ RGQK+P+FS +G+ HN +AAQI RQA +V G D+FA+VFAA+GV A++F+R EE+G+++R LFLNLANDP IERIITPR+ALT AEYLA++ G HVLVILTDM++YA+ALRE+SAAREEVPGR+GYPGY+YTDL+ IYERAGR+ GRKGS+TQ+PILTMP+DDITHP Sbjct: 81 MEMPVSREVLGRIFDGLGRPKDKLPDPIADKFIDINGEAMNPEQREYPKDFIQTGVSAIDGIMTLVRGQKLPIFSGSGMSHNILAAQIARQASVV------------GTGDDFAVVFAAIGVQYSEAEYFRRSLEESGALKRSVLFLNLANDPAIERIITPRVALTVAEYLAFDLGMHVLVILTDMTNYAEALREISAAREEVPGRKGYPGYLYTDLSTIYERAGRLVGRKGSVTQVPILTMPSDDITHP 318
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THEAC (V-type ATP synthase beta chain OS=Thermoplasma acidophilum GN=atpB PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.693e-85 Identity = 150/249 (60.24%), Postives = 192/249 (77.11%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 + P+S DMLGR+FNG G+PID GP I+ + ++I+ ++INP R P E I+TGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++ E NFA+VF AMG+ E A +F F E G++ R +FLNL++DP++ERII PRIALTTAEYLA++ G H+LVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDL+ IYERAG+++G GSITQIPILTMP DDITHP Sbjct: 79 RLPISEDMLGRVFNGIGEPIDGGPEIIAKERMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLDSSE------------NFAVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDPSMERIILPRIALTTAEYLAFQKGMHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLSTIYERAGKLKGNNGSITQIPILTMPGDDITHP 315
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HYPBU (V-type ATP synthase beta chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpB PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.693e-85 Identity = 156/246 (63.41%), Postives = 191/246 (77.64%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +MLGR+FNG G PID GPPI DI+G +NP+ R YPE+ IQTGIS ID MN++ RGQK+P+FS +GLPHN++A QI RQA + GEE FA+VFAA+GV + A FFKR FEE G+++R LF+NLA++P R+ITPR+ALT AE+LA++ G HVLVILTDM++Y +ALRE+SAAREEVPGR+GYPGYMY+DLA IYERAGR GRKGSITQ+PILTMPNDDITHP Sbjct: 90 VSDEMLGRVFNGLGDPIDGGPPITSGVRRDINGEPLNPAARAYPEDFIQTGISAIDGMNTMVRGQKLPIFSGSGLPHNKLAVQIARQA-----------TVRSGEE--FAVVFAAIGVMYDEAIFFKRFFEETGAIKRAALFINLADEPASVRLITPRVALTLAEHLAFDLGMHVLVILTDMTNYCEALREISAAREEVPGRQGYPGYMYSDLASIYERAGRAHGRKGSITQMPILTMPNDDITHP 322
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THET8 (V-type ATP synthase beta chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpB PE=1 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 1.714e-84 Identity = 157/246 (63.82%), Postives = 191/246 (77.64%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +MLGR FNG GKPID PPI PE L I+G +NP R PE+ IQTGISTIDVMN++ RGQK+P+FS +GLP NEIAAQI RQA + + D E +E+ FA+VFAAMG+ +F ++FE G++ R LFLN A+DPTIERI+TPR+ALT AEYLA+E HVLVILTDM++Y +ALRE+ AAREE+PGRRGYPGYMYTDLA IYERAG +EG+KGS+TQIPIL+MP+DD THP Sbjct: 84 VSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQATV-----RPDLSGEGEKEEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTDMTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHP 324
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THET2 (V-type ATP synthase beta chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpB PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.714e-84 Identity = 157/246 (63.82%), Postives = 191/246 (77.64%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +MLGR FNG GKPID PPI PE L I+G +NP R PE+ IQTGISTIDVMN++ RGQK+P+FS +GLP NEIAAQI RQA + + D E +E+ FA+VFAAMG+ +F ++FE G++ R LFLN A+DPTIERI+TPR+ALT AEYLA+E HVLVILTDM++Y +ALRE+ AAREE+PGRRGYPGYMYTDLA IYERAG +EG+KGS+TQIPIL+MP+DD THP Sbjct: 84 VSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQATV-----RPDLSGEGEKEEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTDMTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHP 324
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_DICTD (V-type ATP synthase beta chain OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=atpB PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.714e-84 Identity = 154/246 (62.60%), Postives = 188/246 (76.42%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +S ++LGR F+G G+P D GP I+P+ +DI+GS INP R YP+E IQTGIS ID MN+I RGQKIP+FS AGLPH +AAQI RQA L+ EE+ FA+VF AMG+ E A FF +F G++ER LF+NLANDP IERI TPR ALT AEYLA++ HVLVIL+DM++YA+ALREVSA+R+EVPGRRGYPGY+YTDLA +YERAGRI+G+KGSIT +PILTMP DD THP Sbjct: 81 LSPEILGRTFDGLGRPRDGGPEIIPQKRMDINGSPINPYSRAYPQEFIQTGISAIDGMNTIVRGQKIPIFSGAGLPHATLAAQIARQARLLN------------EEEKFAVVFGAMGITFEEANFFIENFRSTGALERTVLFINLANDPVIERIATPRFALTAAEYLAFDLDMHVLVILSDMTNYAEALREVSASRKEVPGRRGYPGYLYTDLATLYERAGRIKGKKGSITLLPILTMPEDDRTHP 314 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |