CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOB6 (V-type ATP synthase beta chain OS=Clostridium botulinum (strain 657 / Type Ba4) GN=atpB PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.475e-83 Identity = 152/246 (61.79%), Postives = 188/246 (76.42%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G P D GP I+P+ DISG INP R YP+E IQTG+S ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++ + FA+VFAA+G E AQ+F DF + G+++R LF+NLANDP IERI TPR+ALT AEYLA+E G HVLVI+TD+++Y +ALREVSAAR+EVPGRRGYPGY+YTDL+ IYERAGRI G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGLGNPKDGGPKIIPDEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLN------------SDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLFINLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOBJ (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Kyoto / Type A2) GN=atpB PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 5.513e-83 Identity = 152/246 (61.79%), Postives = 188/246 (76.42%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G P D GP I+ + DISG INP R YP+E IQTG+S ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++K + FA+VFAA+G E AQ+F DF + G+++R LF+NLANDP IERI TPR+ALT AEYLA+E G HVLVI+TD+++Y +ALREVSAAR+EVPGRRGYPGY+YTDL+ IYERAGRI G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGLGNPKDGGPKIIADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLK------------SDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLFINLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_PICTO (V-type ATP synthase beta chain OS=Picrophilus torridus GN=atpB PE=3 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.228e-82 Identity = 153/249 (61.45%), Postives = 190/249 (76.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 + PVS DMLGRIFNG G+PIDNGP I + LDI+GS+INP R P E +QTGISTID MN++ GQK+P+FS AGL HN +AAQI RQA L+ GE NF +VF A+G+ E A +F +F+ +GS+ +FLNLA+DP+++RI+ PRIALTTAEYLAYE ++LVILTDM++Y +ALRE+S+AR E+PGRRGYPGYMYTDL+ IYERAG+I GR GSITQIPILTMP DDIT+P Sbjct: 79 RLPVSDDMLGRIFNGFGEPIDNGPKIYSKDKLDINGSAINPYSREEPSEFVQTGISTIDGMNTLVMGQKLPIFSGAGLSHNRLAAQIARQA----------KTLKGGE--NFGVVFGAIGITSEEANYFINEFQSSGSLSNSVIFLNLASDPSMDRIVLPRIALTTAEYLAYEKEMNMLVILTDMTNYCEALREISSARNEIPGRRGYPGYMYTDLSTIYERAGKIRGRNGSITQIPILTMPGDDITNP 315
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_DEIGD (V-type ATP synthase beta chain OS=Deinococcus geothermalis (strain DSM 11300) GN=atpB PE=3 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.604e-82 Identity = 147/246 (59.76%), Postives = 189/246 (76.83%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +M+GR F+G G+PID PP++ E L+I+G +NP+ R PEE IQTGISTIDV S+ RGQK+P+FS +GLPHNE+AAQI RQA + G E +FA+VFAAMG+ FF ++FE G++ R LFLN A+DP +ER++TPR+ALTTAEYLA+E G HVLVILTDM++Y +ALRE+ AREE+PGRRG+PGYMYTDLA +YERAG ++G+ GS+TQIPIL+MP+DDITHP Sbjct: 85 VSREMIGRRFDGLGRPIDGLPPVVAEKRLNINGEPMNPAARAKPEEFIQTGISTIDVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKV------------PGHEGDFAVVFAAMGLTQREVSFFTQEFERTGALARSVLFLNRADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDMTNYCEALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVQGKPGSVTQIPILSMPDDDITHP 318
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_DEIDV (V-type ATP synthase beta chain OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=atpB PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 7.961e-82 Identity = 145/246 (58.94%), Postives = 188/246 (76.42%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +M+GR F+G G+PID P ++ E L I+G ++NP+ R PEE IQTGISTIDV S+ RGQK+P+FS +GLPHNE+AAQI RQA + G E +FA+VFAAMG+ FF ++FE G++ R LFLN A+DP +ER++TPR+ALTTAEYLA+E G HVLVILTD+++Y +ALRE+ AREE+PGRRG+PGYMYTDLA +YERAG +EG+ GS+TQ+PIL+MP+DDITHP Sbjct: 84 VSKEMIGRRFDGLGRPIDGLPQVVAEQRLSINGQAMNPAARAKPEEFIQTGISTIDVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKV------------PGHEGDFAVVFAAMGLTQREVSFFTQEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCEALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGSVTQVPILSMPDDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOD6 (V-type ATP synthase beta chain OS=Clostridium difficile (strain 630) GN=atpB PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.358e-81 Identity = 144/246 (58.54%), Postives = 190/246 (77.24%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS D+LGR+F+G G+PID GP I+P+ LDI+G+ INP+ R YP E IQTG+S ID +N++ RGQK+P+FS +GLPH +A QI RQA + G + FA+VFAA+G+ E A+FF DF+ G+++R +F+NLANDP +ER+ TPR+ALT AEYLA+E HVLVI+TD+++YA+ALREVSAA++EVPGRRGYPGY+YTDLA +YERAG+++G +GSIT IPILTMP DD THP Sbjct: 81 VSPDILGRVFSGMGRPIDGGPEIIPDKRLDINGAPINPAARDYPAEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHANLAVQIARQAKV------------RGTDSKFAVVFAAVGITFEDAEFFISDFKATGAIDRSVVFVNLANDPAVERVSTPRMALTAAEYLAFEQDMHVLVIITDITNYAEALREVSAAKKEVPGRRGYPGYLYTDLATMYERAGKMKGHEGSITMIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_COPPD (V-type ATP synthase beta chain OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=atpB PE=3 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.774e-81 Identity = 150/246 (60.98%), Postives = 184/246 (74.80%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +LGR+F+G G+P+D P + Y+DI+G+ +NP R YP E IQTGIS ID MN++ RGQK+P+FS +GLPH +AAQI QA ++ E+ FA+VFAAMG+ E A FF + F++ G++ER LFLNLA+DPTIERI TPR AL AEYLA+E HVL ILTDM++Y +ALRE+SAAR EVPGRRGYPGYMYTDLA IYERAGRI+G+KGSITQIPILTMP DD THP Sbjct: 80 VSEGILGRVFDGLGEPLDGKPQPFVDKYVDINGAPMNPVSREYPAEFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHARLAAQIASQAKVLS------------SEEKFAVVFAAMGITFEEANFFIQSFQKTGAIERSVLFLNLADDPTIERIATPRFALAAAEYLAFEKDMHVLAILTDMTNYCEALREISAARREVPGRRGYPGYMYTDLASIYERAGRIKGKKGSITQIPILTMPEDDRTHP 313
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_DEIRA (V-type ATP synthase beta chain OS=Deinococcus radiodurans GN=atpB PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.316e-81 Identity = 144/246 (58.54%), Postives = 186/246 (75.61%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS +M+GR F+G G+PID P ++ E L + G +NP+ R PEE IQTGISTIDV S+ RGQK+P+FS +GLPHNE+AAQI RQA + G E +FA+VFAAMG+ FF ++FE G++ R LFLN A+DP +ER++TPR+ALTTAEYLA+E G HVLVILTD+++Y +ALRE+ AREE+PGRRG+PGYMYTDLA +YERAG +EG+ GS+TQ+PIL+MP+DDITHP Sbjct: 84 VSKEMIGRRFDGLGRPIDGLPAVVAEQRLSVDGQPMNPAARAKPEEFIQTGISTIDVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKV------------PGHEGDFAVVFAAMGLTQREVSFFTQEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCEALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGSVTQVPILSMPDDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_SULTO (V-type ATP synthase beta chain OS=Sulfolobus tokodaii GN=atpB PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 5.160e-81 Identity = 148/250 (59.20%), Postives = 190/250 (76.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 ++ +S +MLGRIFN G+P+DNGPP++ +I+G INP+ R YPEE IQTGIS ID +NS+ RGQK+P+FS +GLP N +AAQI +QA + GEE NFA+VFAA+GV + A FF++ FEE G++ RV +F+ LANDP +I+TP+ ALT AEYLA+E HVL IL DM++Y +ALRE+SA+REEVPGR GYPGYMYTDLA IYERAG++ G+KGSITQ+PILTMPNDD+THP Sbjct: 81 LEVKISEEMLGRIFNPLGEPLDNGPPVIGGEKRNINGDPINPATREYPEEFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANTLAAQIAKQATV------------RGEESNFAVVFAAIGVRYDEALFFRKFFEETGAINRVAMFVTLANDPPSLKILTPKTALTLAEYLAFEKDMHVLAILIDMTNYCEALRELSASREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPILTMPNDDMTHP 318
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_IGNH4 (V-type ATP synthase beta chain OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=atpB PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 6.740e-81 Identity = 147/246 (59.76%), Postives = 187/246 (76.02%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGRI N G+PID G PI ++ G INP R YP+E I+TGIS ID MNS+ RGQK+P+FS +GLPHN++AAQI RQA + GEE++FA+VFAA+G+ + FFK+ FEE G++ R +F++LAN+P + +I+TPR ALT AEYLA++ HVLVI+TDM++Y +ALRE+SA+REEVP R+GYPGYMYTDLA IYERAGR++G KGSITQ+PILTMPNDDITHP Sbjct: 87 VSEDMLGRIMNALGEPIDGGAPIKAVEKRNVWGEPINPYAREYPDEFIETGISAIDGMNSLVRGQKLPIFSGSGLPHNKLAAQIARQATV------------RGEEESFAVVFAAVGIQYDELLFFKKAFEETGAISRTAMFVSLANEPAMMKIVTPRAALTLAEYLAFQKDMHVLVIITDMTNYCEALREISASREEVPSRQGYPGYMYTDLATIYERAGRVKGSKGSITQMPILTMPNDDITHP 320 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |