CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METLZ (V-type ATP synthase beta chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpB PE=3 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 1.769e-89 Identity = 162/249 (65.06%), Postives = 192/249 (77.11%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K PVS MLGRI +G GKPID GP I+P+ LDI+G++INP R P + IQTGISTID N++ RGQK+P+FS+AGLPHNEIA QI RQA + G D FA+VFAAMG+ E A +F DFE G++ER +FLNLA+DP +ER +TPR+ALTTAEYLAYE G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G KGS+TQIPILTMP DDITHP Sbjct: 76 KMPVSKTMLGRILSGGGKPIDGGPAIVPDKRLDINGAAINPYARGTPRDFIQTGISTIDGTNTLVRGQKLPIFSSAGLPHNEIALQIARQAKV------------PGSSDEFAVVFAAMGITREEANYFMADFERTGALERAVVFLNLADDPAVERTVTPRLALTTAEYLAYELGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASIYERAGIIKGLKGSVTQIPILTMPGDDITHP 312
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRZJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain JJA) GN=atpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89 Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++ ++NFA+VFAAMG+ E A+FF + + G+++R LF+NLANDP IERI TPRIALT AEYLA+E HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP Sbjct: 83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPS (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain CGSP14) GN=atpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89 Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++ ++NFA+VFAAMG+ E A+FF + + G+++R LF+NLANDP IERI TPRIALT AEYLA+E HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP Sbjct: 83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPN (V-type ATP synthase beta chain OS=Streptococcus pneumoniae GN=atpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89 Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++ ++NFA+VFAAMG+ E A+FF + + G+++R LF+NLANDP IERI TPRIALT AEYLA+E HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP Sbjct: 83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89 Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++ ++NFA+VFAAMG+ E A+FF + + G+++R LF+NLANDP IERI TPRIALT AEYLA+E HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP Sbjct: 83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPI (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89 Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++ ++NFA+VFAAMG+ E A+FF + + G+++R LF+NLANDP IERI TPRIALT AEYLA+E HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP Sbjct: 83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRP4 (V-type ATP synthase beta chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89 Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++ ++NFA+VFAAMG+ E A+FF + + G+++R LF+NLANDP IERI TPRIALT AEYLA+E HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP Sbjct: 83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METMJ (V-type ATP synthase beta chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpB PE=3 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 5.148e-89 Identity = 159/250 (63.60%), Postives = 196/250 (78.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV DMLGRI +G GKPID GP I+PE L+I+G++INP R+ PE+ IQTGISTID N++ RGQK+P+FSA+GLPHN++A QI RQA + G + FA+VFAAMG+ E A +F DFE+ G++ER +FLNLA+DP +ER ITPR+ALTTAEYLA++ G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G KGS+TQIPILTMP DDITHP Sbjct: 75 IKMPVGKDMLGRILSGGGKPIDGGPDIVPEKRLEITGAAINPYARSSPEDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNDVALQIARQAKV------------PGSTEEFAVVFAAMGITREEANYFMADFEKTGALERSVVFLNLADDPAVERTITPRLALTTAEYLAFDLGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASIYERAGIIKGVKGSVTQIPILTMPGDDITHP 312
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METB6 (V-type ATP synthase beta chain OS=Methanoregula boonei (strain 6A8) GN=atpB PE=3 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 6.724e-89 Identity = 159/250 (63.60%), Postives = 194/250 (77.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV +MLGRI +G GKPID GP I+PE LDI+G++INP R P + IQTGISTID N++ RGQK+P+FS AGLPHN +A QI RQA + G ++FA+VFAAMG+ E A +F +DFE G++E +FLNLA+DP +ERIITPR+ALTTAEYLA+E G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G+KGS+TQIPILTMP DDITHP Sbjct: 75 IKMPVGREMLGRILSGGGKPIDGGPEIVPEKRLDITGAAINPWARNSPSDFIQTGISTIDGTNTLVRGQKLPIFSGAGLPHNNVALQIARQAKV------------PGSTESFAVVFAAMGITKEEANYFMQDFERTGALEHAVVFLNLADDPAVERIITPRLALTTAEYLAFELGMHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLACIYERAGIIKGQKGSVTQIPILTMPGDDITHP 312
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METTL (V-type ATP synthase beta chain (Fragment) OS=Methanococcus thermolithotrophicus GN=atpB PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.147e-88 Identity = 158/249 (63.45%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VSL+MLGRIFNG+GKPID GP I+PE LDI+G +NP R P +QTGISTID N++ RGQK+P+FS +GLPHN +AAQI RQA + GE + FA+VFAAMG+ E A +F +F++ G++E +F+NLANDP IERIITPR+ALTTAEYLAYE HVLV+LTDM++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++GRKG++TQIPILTMP+DDITHP Sbjct: 15 KIGVSLEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKLPIFSGSGLPHNTLAAQIARQAKV------------RGEGEQFAVVFAAMGITNEEANYFMEEFKKPGALENAVVFINLANDPAIERIITPRLALTTAEYLAYEKDMHVLVVLTDMTNYCEALREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGRKGTVTQIPILTMPHDDITHP 251 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |