CN188190

Overview
NameCN188190
Unique NameCN188190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METLZ (V-type ATP synthase beta chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpB PE=3 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.769e-89
Identity = 162/249 (65.06%), Postives = 192/249 (77.11%), Query Frame = 1
Query:    7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            K PVS  MLGRI +G GKPID GP I+P+  LDI+G++INP  R  P + IQTGISTID  N++ RGQK+P+FS+AGLPHNEIA QI RQA +             G  D FA+VFAAMG+  E A +F  DFE  G++ER  +FLNLA+DP +ER +TPR+ALTTAEYLAYE G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G KGS+TQIPILTMP DDITHP
Sbjct:   76 KMPVSKTMLGRILSGGGKPIDGGPAIVPDKRLDINGAAINPYARGTPRDFIQTGISTIDGTNTLVRGQKLPIFSSAGLPHNEIALQIARQAKV------------PGSSDEFAVVFAAMGITREEANYFMADFERTGALERAVVFLNLADDPAVERTVTPRLALTTAEYLAYELGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASIYERAGIIKGLKGSVTQIPILTMPGDDITHP 312          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRZJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain JJA) GN=atpB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89
Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+VFAAMG+  E A+FF  +  + G+++R  LF+NLANDP IERI TPRIALT AEYLA+E   HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP
Sbjct:   83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPS (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain CGSP14) GN=atpB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89
Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+VFAAMG+  E A+FF  +  + G+++R  LF+NLANDP IERI TPRIALT AEYLA+E   HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP
Sbjct:   83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPN (V-type ATP synthase beta chain OS=Streptococcus pneumoniae GN=atpB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89
Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+VFAAMG+  E A+FF  +  + G+++R  LF+NLANDP IERI TPRIALT AEYLA+E   HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP
Sbjct:   83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89
Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+VFAAMG+  E A+FF  +  + G+++R  LF+NLANDP IERI TPRIALT AEYLA+E   HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP
Sbjct:   83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRPI (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89
Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+VFAAMG+  E A+FF  +  + G+++R  LF+NLANDP IERI TPRIALT AEYLA+E   HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP
Sbjct:   83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STRP4 (V-type ATP synthase beta chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.018e-89
Identity = 157/246 (63.82%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+VFAAMG+  E A+FF  +  + G+++R  LF+NLANDP IERI TPRIALT AEYLA+E   HVLVI+TDM++Y +ALREVSAAR EVPGRRGYPGY+YT+L+ +YERAGR+ G+KGS+TQIPILTMP DDITHP
Sbjct:   83 VSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLN------------SDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHP 316          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METMJ (V-type ATP synthase beta chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpB PE=3 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.148e-89
Identity = 159/250 (63.60%), Postives = 196/250 (78.40%), Query Frame = 1
Query:    4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            +K PV  DMLGRI +G GKPID GP I+PE  L+I+G++INP  R+ PE+ IQTGISTID  N++ RGQK+P+FSA+GLPHN++A QI RQA +             G  + FA+VFAAMG+  E A +F  DFE+ G++ER  +FLNLA+DP +ER ITPR+ALTTAEYLA++ G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G KGS+TQIPILTMP DDITHP
Sbjct:   75 IKMPVGKDMLGRILSGGGKPIDGGPDIVPEKRLEITGAAINPYARSSPEDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNDVALQIARQAKV------------PGSTEEFAVVFAAMGITREEANYFMADFEKTGALERSVVFLNLADDPAVERTITPRLALTTAEYLAFDLGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASIYERAGIIKGVKGSVTQIPILTMPGDDITHP 312          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METB6 (V-type ATP synthase beta chain OS=Methanoregula boonei (strain 6A8) GN=atpB PE=3 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.724e-89
Identity = 159/250 (63.60%), Postives = 194/250 (77.60%), Query Frame = 1
Query:    4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            +K PV  +MLGRI +G GKPID GP I+PE  LDI+G++INP  R  P + IQTGISTID  N++ RGQK+P+FS AGLPHN +A QI RQA +             G  ++FA+VFAAMG+  E A +F +DFE  G++E   +FLNLA+DP +ERIITPR+ALTTAEYLA+E G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G+KGS+TQIPILTMP DDITHP
Sbjct:   75 IKMPVGREMLGRILSGGGKPIDGGPEIVPEKRLDITGAAINPWARNSPSDFIQTGISTIDGTNTLVRGQKLPIFSGAGLPHNNVALQIARQAKV------------PGSTESFAVVFAAMGITKEEANYFMQDFERTGALEHAVVFLNLADDPAVERIITPRLALTTAEYLAFELGMHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLACIYERAGIIKGQKGSVTQIPILTMPGDDITHP 312          
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METTL (V-type ATP synthase beta chain (Fragment) OS=Methanococcus thermolithotrophicus GN=atpB PE=3 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.147e-88
Identity = 158/249 (63.45%), Postives = 195/249 (78.31%), Query Frame = 1
Query:    7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753
            K  VSL+MLGRIFNG+GKPID GP I+PE  LDI+G  +NP  R  P   +QTGISTID  N++ RGQK+P+FS +GLPHN +AAQI RQA +             GE + FA+VFAAMG+  E A +F  +F++ G++E   +F+NLANDP IERIITPR+ALTTAEYLAYE   HVLV+LTDM++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++GRKG++TQIPILTMP+DDITHP
Sbjct:   15 KIGVSLEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKLPIFSGSGLPHNTLAAQIARQAKV------------RGEGEQFAVVFAAMGITNEEANYFMEEFKKPGALENAVVFINLANDPAIERIITPRLALTTAEYLAYEKDMHVLVVLTDMTNYCEALREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGRKGTVTQIPILTMPHDDITHP 251          
The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATB_METLZ1.769e-8965.06V-type ATP synthase beta chain OS=Methanocorpuscul... [more]
VATB_STRZJ3.018e-8963.82V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPS3.018e-8963.82V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPN3.018e-8963.82V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPJ3.018e-8963.82V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPI3.018e-8963.82V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRP43.018e-8963.82V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_METMJ5.148e-8963.60V-type ATP synthase beta chain OS=Methanoculleus m... [more]
VATB_METB66.724e-8963.60V-type ATP synthase beta chain OS=Methanoregula bo... [more]
VATB_METTL1.147e-8863.45V-type ATP synthase beta chain (Fragment) OS=Metha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bp
GAGGTGAAGACTCCTGTCTCATTGGATATGCTTGGGCGCATTTTTAATGG
TTCTGGGAAACCCATTGATAATGGTCCCCCAATTTTGCCAGAGGCTTACT
TGGATATATCCGGAAGTTCTATCAACCCTAGTGAGAGAACCTATCCTGAA
GAGATGATACAGACAGGGATTTCTACCATTGATGTGATGAACTCCATTGC
TAGAGGACAAAAGATCCCTCTTTTTTCTGCTGCCGGTCTTCCCCATAATG
AAATTGCTGCTCAGATTTGTCGCCAGGCTGGTTTAGTCAAGCGATTGGAG
AAGACTGATAATCTTCTTGAGGATGGGGAAGAGGACAACTTTGCAATTGT
GTTTGCAGCTATGGGTGTAAATATGGAGACTGCACAGTTTTTCAAACGTG
ATTTTGAGGAAAATGGATCAATGGAGCGAGTGACTCTTTTTCTGAATCTG
GCTAACGACCCTACAATTGAACGTATTATCACTCCTCGTATTGCTCTTAC
TACTGCAGAGTATCTGGCATATGAATGTGGGAAGCATGTTCTTGTCATAC
TGACGGACATGAGTTCTTATGCTGATGCTCTTCGTGAGGTGTCTGCTGCC
CGAGAGGAAGTGCCTGGAAGAAGAGGGTATCCTGGGTATATGTATACTGA
TTTGGCTCAAATTTATGAGCGTGCTGGACGAATTGAAGGTCGAAAAGGTT
CCATCACCCAAATTCCAATATTGACTATGCCAAATGACGATATTACACAT
CCC
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