CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB2_METHJ (V-type ATP synthase beta chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB2 PE=3 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.656e-87 Identity = 160/246 (65.04%), Postives = 192/246 (78.05%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+ +G G+P D GP I+PEA LDI+G INP R P E IQTGIS ID +N++ RGQK+P+FS AGLP N++AAQI +QA ++ GE +NFA+VFAAMG+ + A FF ++FEE+G++ERV FLNLA+DPTIERI TPR ALT AE+LAY HVLVILTDM++Y DALRE+S AREE+PGRRGYPGYMYTDLA IYERAGRI+G GSITQIPILTMP+DDITHP Sbjct: 87 VSYDMLGRVLDGVGRPRDGGPEIIPEARLDIAGMPINPYSRDKPAEFIQTGISAIDALNTLVRGQKLPIFSGAGLPANQLAAQIAKQAKVL------------GEGENFAVVFAAMGITYKEASFFMKEFEESGALERVVFFLNLADDPTIERIATPRCALTAAEFLAYTHNLHVLVILTDMTNYCDALREISTAREEIPGRRGYPGYMYTDLATIYERAGRIKGCTGSITQIPILTMPDDDITHP 320
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METAC (V-type ATP synthase beta chain OS=Methanosarcina acetivorans GN=atpB PE=3 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 2.163e-87 Identity = 156/250 (62.40%), Postives = 196/250 (78.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K P S+D+LGRI +GSG P D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA QI RQA + G E FA+VFAAMG+ E AQ+F DFE+ G++ER +FLNLA+DP +ERI+TPR+ALT AEYLAYE G HVLVILTD+++YA+ALR++ AAR EVPGRRGYPGYMYTDLA +YERAG ++G KGS+TQIPIL+MP DDITHP Sbjct: 76 LKLPASIDLLGRILSGSGDPRDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQASV------------PGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHP 313
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HALLT (V-type ATP synthase beta chain OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=atpB PE=3 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.825e-87 Identity = 154/250 (61.60%), Postives = 199/250 (79.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV+ D+LGR+ +GSG+PID+GP I+PE DI G++INP R YPEE I+TG+S ID MN++ RGQK+P+FS++G PH+++A QI RQA + + E D+ E+G E FA++F AMG+ E A F +DFE G++ER +F+NLA+DP +ER +TPR+ LTTAEYLA+E HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRI+GR GS+TQIPILTMP DD THP Sbjct: 75 MKMPVTEDLLGRVLDGSGRPIDDGPEIVPEERQDIVGAAINPYSREYPEEFIETGVSAIDGMNTLVRGQKLPIFSSSGQPHSQLAMQIARQASVPEEEEGGDD--EEGSE--FAVIFGAMGITAEEANEFMQDFERTGALERSVVFMNLADDPAVERTVTPRMVLTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHP 320
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLONN (V-type ATP synthase beta chain OS=Clostridium novyi (strain NT) GN=atpB PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 3.690e-87 Identity = 155/246 (63.01%), Postives = 193/246 (78.46%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +S DMLGR+F+G G+P D GP I+PE DI+G +NP R YP E IQTG+S ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++ G + FA+VFAAMG+ E AQFF +DF + GS++R LF+NLANDP +ERI TPRIALTTAE+LAYE G HVLVI+TDM++YA+ALREVSAAR+EVPGRRGYPGY+YTDL+ +YERAGR++G+ GSITQIPILTMP DD THP Sbjct: 81 LSEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLNPFARDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVL------------GSDSKFAVVFAAMGITFEEAQFFIQDFTKTGSIDRTVLFMNLANDPAVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THEPX (V-type ATP synthase beta chain OS=Thermoanaerobacter sp. (strain X514) GN=atpB PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 4.819e-87 Identity = 157/250 (62.80%), Postives = 194/250 (77.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 ++ VS+DMLGR+F+G G+P D GP I+PE LDI+G+ INP+ R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH ++AAQI RQA ++ G + FA+VFAAMG+ E A +F DF G+++R LF+NLANDP IERI TPR+ALT AE+LAYE HVLVI+TDM++Y +ALREVSAAR+EVPGRRGYPGY+YTDLA IYERAGRI+GRKGSITQIPILTMP DD THP Sbjct: 77 IELGVSIDMLGRVFDGLGRPRDKGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHAQLAAQIARQAKVL------------GTDSKFAVVFAAMGITFEEADYFISDFRRTGAIDRTVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARKEVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THEP3 (V-type ATP synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=atpB PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 6.293e-87 Identity = 157/250 (62.80%), Postives = 194/250 (77.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 ++ VS+DMLGR+F+G G+P D GP I+PE LDI+G+ INP+ R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH ++AAQI RQA ++ G + FA+VFAAMG+ E A +F DF G+++R LF+NLANDP IERI TPR+ALT AE+LAYE HVLVI+TDM++Y +ALREVSAAR+EVPGRRGYPGY+YTDLA IYERAGRI+GRKGSITQIPILTMP DD THP Sbjct: 77 IELGVSIDMLGRVFDGLGRPRDKGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHAQLAAQIARQAKVL------------GSDSKFAVVFAAMGITFEEADYFISDFRRTGAIDRSVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARKEVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_NATPD (V-type ATP synthase beta chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpB PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 8.219e-87 Identity = 155/250 (62.00%), Postives = 197/250 (78.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 ++ P++ ++LGR+ +GSG+PID GP I P+ +I G++INP+ R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPHNE+A QI RQA + + D E G E FA++F AMG+ E A F DFE G++ER +F+NLA+DP +ER +TPR+ALTTAEYLA+E G HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRIEGR+GS+TQIPILTMP DD THP Sbjct: 76 LQMPLTEELLGRVLSGSGEPIDGGPEIEPDEEREIVGAAINPTAREYPEEFIQTGVSAIDGMNTLIRGQKLPIFSGSGLPHNELALQIARQASVPEEESGDD---EAGSE--FAVIFGAMGITQEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEEGYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHP 320
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METVS (V-type ATP synthase beta chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpB PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.402e-86 Identity = 154/249 (61.85%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VS DMLGRIFNG+GKP+D GP I+ E +DI+G +NP R P +QTGISTID N++ RGQKIP+FS +GLPHN +AAQI RQA + GE + FA+VFAAMG+ E + +F +F++ G++E+ +F+NLA+DP IERIITPRIALTTAEYLAYE G HVLVILTD+++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++G++G++TQIPILTMP+DDITHP Sbjct: 83 KIGVSKDMLGRIFNGAGKPLDGGPEIIAEKKVDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNMLAAQIARQAKV------------RGEGEQFAVVFAAMGITSEESNYFMDEFKKTGALEKAVVFINLADDPAIERIITPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLASLYERAGRVKGKEGTVTQIPILTMPHDDITHP 319
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METM7 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpB PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.831e-86 Identity = 154/249 (61.85%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTGISTID N++ RGQKIP+FS +GLPHN++A QI RQA + GE + FA+VFAAMG+ E + +F +F++ G++E+ +F+NLA+DP IERI+TPRIALTTAEYLAYE G HVLVILTD+++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++GR+G++TQIPILTMP+DDITHP Sbjct: 83 KIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKV------------RGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPILTMPDDDITHP 319
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METM6 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpB PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.831e-86 Identity = 154/249 (61.85%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTGISTID N++ RGQKIP+FS +GLPHN++A QI RQA + GE + FA+VFAAMG+ E + +F +F++ G++E+ +F+NLA+DP IERI+TPRIALTTAEYLAYE G HVLVILTD+++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++GR+G++TQIPILTMP+DDITHP Sbjct: 83 KIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKV------------RGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPILTMPDDDITHP 319 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |