CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METBU (V-type ATP synthase beta chain OS=Methanococcoides burtonii (strain DSM 6242) GN=atpB PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.831e-86 Identity = 155/250 (62.00%), Postives = 195/250 (78.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS DMLGRI +G+G+P+D GP I+P+ +DI+G+S+NP R PE+ IQTGISTID N++ RGQK+P+FS +GLPHNEIA QI RQA + G ++ FA+VFAAMG+ E AQ+F DFE+ G++ER +FLNLA+DP +ERI+TPR+ALT AEYLAYE HVLVILTD+++Y +ALR++ AAREEVPGRRGYPGYMYTDLA +YERAG I+G KGS+TQ ILTMP DDITHP Sbjct: 76 IKLPVSKDMLGRILSGAGEPLDGGPRIIPDKRVDINGASMNPYSRMPPEDFIQTGISTIDGTNTLVRGQKLPIFSGSGLPHNEIALQIARQAKV------------PGSDEPFAVVFAAMGITNEEAQYFMDDFEKTGALERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHDMHVLVILTDITNYCEALRQMGAAREEVPGRRGYPGYMYTDLASLYERAGVIKGIKGSVTQFSILTMPGDDITHP 313
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_AERPE (V-type ATP synthase beta chain OS=Aeropyrum pernix GN=atpB PE=3 SV=2) HSP 1 Score: 318.546 bits (815), Expect = 2.391e-86 Identity = 153/250 (61.20%), Postives = 198/250 (79.20%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 ++ PV+ DMLGRI NG G+PID GP I + D++G+ +NP+ER YPE+ IQTG+S ID MN++ RGQK+P+FS AGLPHN +AAQI RQA + GEE+ FA+VF+A+G+ + FFK+ FEE G++ RV +F+NLA++P + R+ITPR ALT AEYLAYE HVLVI+TDM++YA+ALRE+SAAREEVPGR+GYPGY+Y+DLA IYERAGR++G+KGSITQ+PILTMPNDDITHP Sbjct: 80 LEIPVTEDMLGRIMNGLGEPIDGGPKIDADERRDVNGAPLNPAERAYPEDFIQTGVSAIDGMNTLVRGQKLPIFSGAGLPHNRLAAQIARQATV------------RGEEEEFAVVFSAIGIKYDDFLFFKKFFEETGALGRVAMFVNLADEPAMIRLITPRAALTLAEYLAYERDMHVLVIITDMTNYAEALREISAAREEVPGRQGYPGYLYSDLASIYERAGRVKGKKGSITQMPILTMPNDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METMP (V-type ATP synthase beta chain OS=Methanococcus maripaludis GN=atpB PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 5.328e-86 Identity = 152/249 (61.04%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTG+STID N++ RGQKIP+FS +GLPHN++A QI RQA + GE + FA+VFAAMG+ E + +F +F++ G++E+ +F+NLA+DP IERI+TPRIALTTAEYLAYE G HVLVILTD+++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++G++G++TQIPILTMP+DDITHP Sbjct: 83 KIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKV------------RGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHP 319
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HALWD (V-type ATP synthase beta chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpB PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 5.328e-86 Identity = 154/250 (61.60%), Postives = 194/250 (77.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K V+ D+LGR+ +GSG+PID GP IL + +I G++INP R YPEE IQTG++ +D MN++ RGQK+P+FS +GLPHNE+A QI RQA V E D+ +DG E FA++F AMG+ E A F DFE G++ER +F+NLA+DP +ER +TPR+ LTTAEYLA+E HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLA +YERAGRIEGR+GS+TQIPILTMP DD THP Sbjct: 75 LKMKVTEDLLGRVLDGSGQPIDGGPEILADERREIVGAAINPYAREYPEEFIQTGVAAVDGMNTLVRGQKLPIFSGSGLPHNELALQIARQA-TVPEEENADDNEDDGSE--FAVIFGAMGITAEEANEFMEDFERTGALERSVVFMNLADDPAVERTVTPRMVLTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLATLYERAGRIEGREGSVTQIPILTMPGDDDTHP 321
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_META3 (V-type ATP synthase beta chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=atpB PE=3 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 6.958e-86 Identity = 151/249 (60.64%), Postives = 193/249 (77.51%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VS DMLGRIFNG+GKP+D GP I+ E +DI+G +NP R P + +QTGISTID N++ RGQKIP+FS +GLPHN +AAQI RQA + G ++ FA+VFAAMG+ E + +F +F+ G++E +F+NLA+DP IERI+TPRIALTTAEYLAYE G HVLVI+TD+++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++G+ G++TQIPILTMP+DDITHP Sbjct: 83 KLGVSTDMLGRIFNGAGKPLDGGPDIIAEDKIDINGYPLNPVSRQSPNDFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNLLAAQIARQAKV------------RGSDEQFAVVFAAMGITAEESNYFMNEFKRTGALENAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVIMTDITNYCEALREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGKSGTVTQIPILTMPHDDITHP 319
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METM5 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpB PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 9.088e-86 Identity = 152/249 (61.04%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTG+STID N++ RGQKIP+FS +GLPHN++A QI RQA + GE + FA+VFAAMG+ E + +F +F++ G++E+ +F+NLA+DP IERI+TPRIALTTAEYLAYE G HVLVILTD+++Y +ALRE++AAR EVPGRRGYPGYMYTDLA +YERAGR++G++G++TQIPILTMP+DDITHP Sbjct: 83 KIGVSHDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKV------------RGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHP 319
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_ENTFA (V-type ATP synthase beta chain OS=Enterococcus faecalis GN=atpB PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 9.088e-86 Identity = 153/246 (62.20%), Postives = 191/246 (77.64%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GR+F+G G+ DNGP +LPE LDI+G INP R YP+E IQTGIS ID +N++ RGQK+P+FSA+GLPH E+AAQI RQA ++ E+ FA+VFAA+G+ E A++F DF + G+++R LF+NLANDP IERI TPR+ALT AEYLAYE G HVLVI+TDM++Y +ALRE+SAAR EVPGRRGYPGY+YT+LA +YERAGRI G KGS+TQIPILTMP +D THP Sbjct: 81 VSPDMMGRVFDGLGRLKDNGPELLPEKKLDINGEVINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGLPHKELAAQIARQANVLN------------SEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLANDPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOPS (V-type ATP synthase beta chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpB PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.025e-85 Identity = 153/246 (62.20%), Postives = 193/246 (78.46%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G+P DNGP I+PE LDI+G +INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++ + FA+VFAA+G+ E A+FF +F + G+++R LF+NLA+DP IERI TPR+ALTTAEYLAYE G HVLVI+TD+++Y +ALREVSAAR+EVPGRRGYPGY+YTDL+ +YERAGR+ G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGMGRPKDNGPNIIPEKRLDINGEAINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHKELAAQIARQAKVLN------------SDSKFAVVFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDPAIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYLYTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOPE (V-type ATP synthase beta chain OS=Clostridium perfringens GN=atpB PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.025e-85 Identity = 153/246 (62.20%), Postives = 193/246 (78.46%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G+P DNGP I+PE LDI+G +INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++ + FA+VFAA+G+ E A+FF +F + G+++R LF+NLA+DP IERI TPR+ALTTAEYLAYE G HVLVI+TD+++Y +ALREVSAAR+EVPGRRGYPGY+YTDL+ +YERAGR+ G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGMGRPKDNGPNIIPEKRLDINGEAINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHKELAAQIARQAKVLN------------SDSKFAVVFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDPAIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYLYTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CLOP1 (V-type ATP synthase beta chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpB PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.025e-85 Identity = 153/246 (62.20%), Postives = 193/246 (78.46%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+F+G G+P DNGP I+PE LDI+G +INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++ + FA+VFAA+G+ E A+FF +F + G+++R LF+NLA+DP IERI TPR+ALTTAEYLAYE G HVLVI+TD+++Y +ALREVSAAR+EVPGRRGYPGY+YTDL+ +YERAGR+ G++GSITQIPILTMP DD THP Sbjct: 81 VSEDMLGRVFDGMGRPKDNGPNIIPEKRLDINGEAINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHKELAAQIARQAKVLN------------SDSKFAVVFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDPAIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYLYTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHP 314 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |