CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB1_GOSHI (V-type proton ATPase subunit B 1 OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 489.574 bits (1259), Expect = 7.833e-138 Identity = 246/250 (98.40%), Postives = 248/250 (99.20%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKT +LLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHP Sbjct: 93 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTGDLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 342
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB2_ARATH (V-type proton ATPase subunit B2 OS=Arabidopsis thaliana GN=VHA-B2 PE=2 SV=1) HSP 1 Score: 485.723 bits (1249), Expect = 1.131e-136 Identity = 244/250 (97.60%), Postives = 247/250 (98.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK+DNLLE E+DNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHP Sbjct: 92 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 341
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB1_ARATH (V-type proton ATPase subunit B1 OS=Arabidopsis thaliana GN=VHA-B1 PE=2 SV=2) HSP 1 Score: 483.026 bits (1242), Expect = 7.331e-136 Identity = 244/250 (97.60%), Postives = 246/250 (98.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKT +LLED EDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHP Sbjct: 91 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTVDLLEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 340
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB3_ARATH (V-type proton ATPase subunit B3 OS=Arabidopsis thaliana GN=VHA-B3 PE=2 SV=1) HSP 1 Score: 481.485 bits (1238), Expect = 2.133e-135 Identity = 244/251 (97.21%), Postives = 247/251 (98.41%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLL-EDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKT+NL+ ED EDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHP Sbjct: 91 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 341
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB2_HORVU (V-type proton ATPase subunit B 2 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 6.206e-135 Identity = 241/250 (96.40%), Postives = 245/250 (98.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLE++ + E GEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHP Sbjct: 88 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEQSKHAAEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 337
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB1_HORVU (V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 473.396 bits (1217), Expect = 5.809e-133 Identity = 239/250 (95.60%), Postives = 242/250 (96.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK + GE+DNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGR GSITQIPILTMPNDDITHP Sbjct: 93 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKGKHAEGGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRTGSITQIPILTMPNDDITHP 342
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB2_GOSHI (V-type proton ATPase subunit B 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 1.431e-131 Identity = 235/240 (97.92%), Postives = 236/240 (98.33%), Query Frame = 1 Query: 34 GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIP FSAAGLPHNEIAAQICRQAGLVKRLEK +LLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDITHP Sbjct: 1 GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPFFSAAGLPHNEIAAQICRQAGLVKRLEKAGDLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHP 240
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB1_ACEAT (V-type proton ATPase subunit B 1 OS=Acetabularia acetabulum PE=2 SV=1) HSP 1 Score: 441.425 bits (1134), Expect = 2.446e-123 Identity = 221/251 (88.05%), Postives = 236/251 (94.02%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDG-EEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 + TPVS DMLGR+FNGSGKPID GPP+L EAYLDI GSSINPSERTYPEEMIQTG+STIDVMNSIARGQKIPLFSAAGLPHN+IAAQICRQAGLVKR + D++++ G EE+ FAIVFAAMGVNMETA +FK+DFEENGSME+ LFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQ+PILTMPNDDITHP Sbjct: 98 LSTPVSKDMLGRVFNGSGKPIDGGPPVLAEAYLDIQGSSINPSERTYPEEMIQTGVSTIDVMNSIARGQKIPLFSAAGLPHNDIAAQICRQAGLVKRGNQ-DSMIDAGHEEEEFAIVFAAMGVNMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMPNDDITHP 347
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB2_ACEAT (V-type proton ATPase subunit B 2 OS=Acetabularia acetabulum PE=2 SV=1) HSP 1 Score: 434.106 bits (1115), Expect = 3.906e-121 Identity = 217/251 (86.45%), Postives = 234/251 (93.23%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDG-EEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 + TPVS DMLGR+FNGSGKPID GP +L EAYLDI GSSINPSERTYPEEM QTG+STIDVMNSIARGQKIPLFSAAGLPHN+IAAQICRQAGLV++ + D++++ G EE+ FAIVFAAMGVNMETA +FK+DFEENGSME+ LFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQ+PILTMPNDDITHP Sbjct: 98 LSTPVSKDMLGRVFNGSGKPIDGGPTVLAEAYLDIQGSSINPSERTYPEEMSQTGVSTIDVMNSIARGQKIPLFSAAGLPHNDIAAQICRQAGLVRQ-KAQDSMIDAGREEEEFAIVFAAMGVNMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMPNDDITHP 347
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_CYACA (V-type proton ATPase subunit B OS=Cyanidium caldarium PE=3 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.101e-115 Identity = 208/250 (83.20%), Postives = 224/250 (89.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +KTPVSLDMLGR+FNGSGKPID GPPILPEAYLDI G INP RTYPEEM +TGIS+IDVMNSIARGQKIPLFS AGLPHNE+AAQICRQ LV +D E++FAIVFAAMGVNMETA+FF++DFEENG+MERVTLFLNLANDPTIERIITPR+ALT AEYLAYE GKHVLVILTDMS+YADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGR+EGR GSITQ+PILTMPNDDITHP Sbjct: 95 LKTPVSLDMLGRVFNGSGKPIDGGPPILPEAYLDIQGQPINPQSRTYPEEMFETGISSIDVMNSIARGQKIPLFSGAGLPHNEVAAQICRQVCLVSTCTLVKRSGKD--EEDFAIVFAAMGVNMETARFFRQDFEENGAMERVTLFLNLANDPTIERIITPRLALTFAEYLAYEKGKHVLVILTDMSAYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRVEGRPGSITQLPILTMPNDDITHP 342 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |