EY666011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 296 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 508 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 117
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 296 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 508 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 117
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 296 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 508 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE Sbjct: 49 WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPE 116
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13 Identity = 38/75 (50.67%), Postives = 45/75 (60.00%), Query Frame = 2 Query: 296 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNK 520 WYG DR FL E P YL GE GDYG+D GLS P+ F++ + E+IHARWAMLGA G + PE K Sbjct: 52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 305 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKL 523 PDR ++ P S P +L G +PGD+G+DP GL+ P+ Q EL+H RWAMLGAAG IPE K+ Sbjct: 63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKI 130
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 305 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKL 523 PDR ++ P S PE+L G +PGD+G+DP GL P+ EL+H+RWAMLGAAG IPE K+ Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKI 130
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 296 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 508 WYG DR ++L G L S P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA+ G + PE Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPE 115
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 350 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNK 520 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSR 61
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 356 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKL 523 P+YLTG + GD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F K+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKI 119
BLAST of EY666011 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 356 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKL 523 P YLTG +PGD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F + Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSI 118 The following BLAST results are available for this feature:
BLAST of EY666011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666011 ID=EY666011; Name=EY666011; organism=Citrus sinensis; type=EST; length=859bpback to top |