CN188178

Overview
NameCN188178
Unique NameCN188178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN188178 vs. ExPASy Swiss-Prot
Match: CCPR_KLULA (Cytochrome c peroxidase, mitochondrial OS=Kluyveromyces lactis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = -3 
Query:  353 MGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGE---------------SEGLLQLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAASHKKLSELG 646
            +   D+ +VAL G H LG+ H + SGF+GPW      F N ++  LLN +                +G + LPTD AL++DP++   V+ +A D+D FF+++  +   L E G
Sbjct:  214 LNFEDRQVVALLGAHALGKTHLKNSGFEGPWGAATNIFTNEFYNNLLNEKWDLITNDAGNKQYVNDKGWMMLPTDMALVQDPKYLPIVKEFANDQDTFFKEFTKAFVVLLENG 326
The following BLAST results are available for this feature:
BLAST of CN188178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CCPR_KLULA2.047e-1333.63Cytochrome c peroxidase, mitochondrial OS=Kluyvero... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188178 ID=CN188178; Name=CN188178; organism=Citrus sinensis; type=EST; length=648bp
GCAGTCTCAAAACGACATTGTTTTATTGAATTTTCGGGGCTTGACCCGGG
GTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCTAATTGCCCAG
CGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGGCTGGCGAGTT
CTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAACCAAATACAA
ATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTTCGTAAAAGTA
GCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACTGCACCTTGAG
CTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGAACCGGGTGAA
AACCCTAGCTCTGAAAGTTTCTTATGTGATGCTGCATAATCTCTAAAGAA
TGCATCCTCATCCTTTGCATACAACTCAACATAACGACGGAACTCAGGGT
CTTCTAATAAAGCCTTGTCTGTTGGAAGTTGCAGTAATCCTTCTGATTCC
CCATTCAGCAACTCCACAAAGTATGAGTTATCAAATTTCAGAGGCTCCCT
GGTCCAAGGGCCGTCAAAACCTGATCTCTCTGGATGTGCCCTTCCCAAAG
TATGGCCCCCTGAGAGTGCCACTATATCCTTGTCAGACAGACCCATCC
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