CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACC4 (Triosephosphate isomerase OS=Bacillus cereus (strain B4264) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACC2 (Triosephosphate isomerase OS=Bacillus cereus (strain G9842) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTLAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACCN (Triosephosphate isomerase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=tpiA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.520e-39 Identity = 102/228 (44.74%), Postives = 126/228 (55.26%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A EV +RK + SP A A RI YGGSV N KE AQPD+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATQGTDLKVGAQNMHFEKNGAFTGEISPVALSDLKVSYVVLGHSERREMFAETDETVNKKTLAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSAEDANEVCAHIRKVVAEAVSPAAAEAVRIQYGGSVKPGNIKEYMAQPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_HERAR (Triosephosphate isomerase OS=Herminiimonas arsenicoxydans GN=tpiA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.593e-39 Identity = 100/229 (43.67%), Postives = 127/229 (55.46%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVA--AQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK NG+ +++ + +L L SL D +A AQ+ GA+TGE+S ML+ +VI+GHSERR E+NE V K ALS GL I CVGETLEQREAG T +VV Q A+ + + + IV+AYEPVWAIGTGK ATP AQEVH LR+ L A + + A RI+YGGS+ N KEL A PD+ Sbjct: 2 RRKLVAGNWKMNGSLAANALLLAEIKAEFGNPACDVAVCVPAPYLAQCL---SLLSDSTIALGAQDVSSHDSGAYTGEVSTAMLLEFACRYVIVGHSERRAYFGETNELVAQKTVRALSAGLMPIVCVGETLEQREAGQTDEVVGRQIDAVLSSIAENDLAKIVVAYEPVWAIGTGKTATPEMAQEVHVMLRRRLHAKNA-QAATEVRILYGGSMKPDNAKELLAMPDI 226
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4) HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39 Identity = 100/229 (43.67%), Postives = 128/229 (55.90%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRP-DFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA---IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK + T E KK VS+L + F L V L + + AQN + + GAFTGEIS ML +G+ +VI+GHSERR I E +EF+ KV L +G+ I CVGETLE+RE G T VV Q + D+ + +V+AYEPVWAIGTG+VATP QAQEVH +RK L E A + RI+YGGS+ N L Q D+ Sbjct: 402 RKLILAGNWKMHKTISEAKKFVSLL-VNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEA-KRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDI 628
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEE4 (Triosephosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 95/229 (41.48%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVK-KGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++ L G LF+ V L +V AQN V+ + GA TGE++ L +G +V++GHSERR I+ ES+E + K A A GL + C+GETL +REAG T+ VV Q ++ D + +++N V+AYEPVWAIGTG A+P QAQ+VH +RK L A E+AA +++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVVELTQGL--GNMSLPSGVEVAVFPPSLFVTQVIDGLEGKGINVGAQNSAVQPEQGALTGEVAPSQLAEVGCKYVLVGHSERRQIIGESDEVLNQKFAAAQKSGLTPVLCIGETLAEREAGETLKVVGRQLSSVIDAFGIKAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQL-AAMDAEVAANVQLLYGGSVKAANAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAE (Triosephosphate isomerase OS=Pseudomonas aeruginosa GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 100/229 (43.67%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V +++ L Q LF+ V L V AQN V+ GA TGE + L ++G V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGSV A+ EL PD+ Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAB (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 100/229 (43.67%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V +++ L Q LF+ V L V AQN V+ GA TGE + L ++G V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGSV A+ EL PD+ Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA8 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 100/229 (43.67%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V +++ L Q LF+ V L V AQN V+ GA TGE + L ++G V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGSV A+ EL PD+ Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA7 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain PA7) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 101/229 (44.10%), Postives = 130/229 (56.77%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++ L Q LF+ V L V AQN V+ GA TGEI+ L + G V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+PAQAQEVH +R L A + E+A R++YGGSV A+ EL PD+ Sbjct: 2 RRPLVAGNWKMHGTHSSVADLIKGLR--QLALPSGVDVAVMPPCLFISQVVQGLAGKAIGVGAQNSAVEPMQGALTGEIAPSQLADAGCGMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDI 227 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |