CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_HAES1 (Triosephosphate isomerase OS=Haemophilus somnus (strain 129Pt) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 94/230 (40.87%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M R+ V GNWK NG+ K++++ L + + ++L +++L D + QN + K GAFTG+IS EML + G+ +VI+GHSERR +ES+EF+ K GL + C+GE+ + EAG T +V A Q A+ + V +++ V+AYEP+WAIGTGK ATPAQAQ VH +R + A S +A I YGGSVN AN EL QPD+ Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELITGLKD-ELNAVSGCDVAIAPPVMYLAEAETALVSSDIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVMNTLGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHI-AKQSQAVAERVIIQYGGSVNDANAAELFTQPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CARHZ (Triosephosphate isomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 102/228 (44.74%), Postives = 128/228 (56.14%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSWS-NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK F+ GNWK TP E V L + F L VK +L + + AQN +K GAFTGE+S ML ++G+ +VILGHSERR E++E + K+ A + GL I CVGETLE+RE G T VV Q K +A + + N+ +AYEPVWAIGTGK ATP AQEV +R+ L EIA RI YGGSV N KEL A+PD+ Sbjct: 2 RKPFIAGNWKMYKTPVEAAGFVRELIDS-LKDVSGVDVAVCPPFPALWPVKEALEGSNIALGAQNMHFEKEGAFTGEVSPAMLQDIGVKYVILGHSERRAYFGETDELINQKIKAAFTWGLNPIFCVGETLEERERGITKAVVEIQVLKGLAGVTAEQAENLTIAYEPVWAIGTGKTATPDDAQEVCQFIRELLVKLFGREIADKVRIQYGGSVKPENIKELIAKPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_VIBSA (Triosephosphate isomerase OS=Vibrio sp. (strain ANT-300) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 94/227 (41.41%), Postives = 123/227 (54.19%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK N T V+ +++ L + + + AQ+C V GAFTGE SA ML G + ++GHSERR+I ES+E V DK A GL + C+GETLEQ EAG T VV AQ +A+ + ++S +N V+ YEPVWAIGTGK ATP AQE+ +R WL A +A +I+YGGSV AN EL Q D+ Sbjct: 2 RQALVMGNWKLNATKGSVEALINGLVDAAKDNATVEVAVCPPAVFIPQVEALTADTAITYGAQDCDVNTSGAFTGENSAVMLKEFGCKYTLVGHSERRVIHGESSEVVADKFAVTPENGLVPVLCIGETLEQFEAGETKAVVEAQLQAVVTKSGITSLNNAVIGYEPVWAIGTGKTATPEIAQEIPAHIRSWL-AEQDAAVANKVQILYGGSVKPANSAELFGQADI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_KLEPN (Triosephosphate isomerase OS=Klebsiella pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 96/224 (42.86%), Postives = 125/224 (55.80%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 V GNWK NG+ V ++V+ L + ++L L K + H+ AQN V GAFTGE SAEML ++G ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ + + +V+AYEPVWAIGTGK ATPAQAQ VH +R + A +IA I YGGSVN N EL QPD+ Sbjct: 6 VMGNWKLNGSRHMVNELVANLRT-ELAGVSGCAVAIAPPEMYLDLAKRAAEGSHIHLGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAVFEGVVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNAGNAAELFTQPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_HAHCH (Triosephosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 93/226 (41.15%), Postives = 128/226 (56.64%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDF-HVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK NG+ E K ++ + + F +L V+S++ + +QNC + GA+TGE+SA+M ++ WVILGHSERR + E++E + KV A+ GL I CVGETL RE+G +V Q A+ V + V+AYEPVWAIGTGK A+P AQ +H LR + P+IA RI+YGGSV +N KEL + PDV Sbjct: 2 RKKLIAGNWKSNGSLERNKALLEGIVNAKALGSVDVVVCPP--FPYLQSVESAVSDSMIELGSQNCSATEDGAYTGEVSAKMCADMKCSWVILGHSERRALYAENDEVIACKVKRAVESGLAPILCVGETLADRESGRAEEVTLKQLDAVFMSVQPDDSWVVAYEPVWAIGTGKTASPEDAQSMHKALRNNI-RKHFPQIADKIRILYGGSVKSSNAKELFSMPDV 224
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_HAES2 (Triosephosphate isomerase OS=Haemophilus somnus (strain 2336) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 93/230 (40.43%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M R+ V GNWK NG+ K++++ L + + ++L +++L D + QN + K GAFTG+IS EML + G+ +VI+GHSERR +ES+EF+ K GL + C+GE+ + EAG T +V A Q A+ + V +++ V+AYEP+WAIGTGK ATPAQAQ VH +R + A S +A I YGGS+N AN EL QPD+ Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELITGLKD-ELNAVSGCDVAIAPPVMYLAEAEAALVSSDIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVMNTLGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHI-AKQSQAVAERVIIQYGGSINDANAAELFTQPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACC7 (Triosephosphate isomerase OS=Bacillus cereus (strain AH187) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 102/228 (44.74%), Postives = 126/228 (55.26%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPAAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACC1 (Triosephosphate isomerase OS=Bacillus cereus (strain ATCC 10987) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 102/228 (44.74%), Postives = 126/228 (55.26%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPAAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACC0 (Triosephosphate isomerase OS=Bacillus cereus (strain AH820) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39 Identity = 102/228 (44.74%), Postives = 126/228 (55.26%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPAAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FLAJ1 (Triosephosphate isomerase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.544e-39 Identity = 93/228 (40.79%), Postives = 135/228 (59.21%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK V GNWK + + +++++ L + F+ L + L+ V+AQN +GGAFTGEISA+ML ++G+ VILGHSERR I +E++ + +KV AL + VI C GE L+ R++G+ ++V Q + ++ SWS IVLAYEPVWAIGTG+ A+P QAQE+H +R+ + EIA I+YGGSV N KE+ ++PDV Sbjct: 2 RKSIVAGNWKMHKNAAQTEELLNELI-AKIPAKTNAQVIVAPTFVNLQAAAAKLKNTTIGVSAQNVHQAEGGAFTGEISADMLTSIGVNTVILGHSERRAIFHETDALIANKVDTALKHDMTVIFCFGEELKDRQSGNHFNIVENQLRDGVFHIAKESWSKIVLAYEPVWAIGTGETASPEQAQEMHEFIRETIRKAFGAEIADEVSILYGGSVKPENAKEIFSKPDV 228 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |