CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACAN (Triosephosphate isomerase OS=Bacillus anthracis GN=tpiA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.544e-39 Identity = 102/228 (44.74%), Postives = 126/228 (55.26%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEVVSPAAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPF (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 98/229 (42.79%), Postives = 132/229 (57.64%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++++ L L++ V L+ V AQN V+ GA TGEI+ LV+ G V++GHSERR I+ E + + K A A + GL + CVGETLEQREAG T++VV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R+ L A S E+A R++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVAELINGLRH--LALPSGVDVAVFPPCLYINQVIDGLKGKSISVGAQNSAVESMQGALTGEIAPSQLVDAGCSLVLVGHSERRQIMGERDGMLNRKFAAAQACGLIPVLCVGETLEQREAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHKAIREQLAAENS-EVARGVRLLYGGSVKAANAVELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_OCEIH (Triosephosphate isomerase OS=Oceanobacillus iheyensis GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 100/228 (43.86%), Postives = 129/228 (56.58%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIV-SVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N E + + SV+ + FL LV+ + + VAAQN + GAFTGE+S ML +LG+ V+LGHSERR + E+NE V K A + L I CVGETL+QREA TM++V Q K A+A + + ++AYEPVWAIGTGK AT QA EV E+RK + TS ++A I YGGSV AN EL AQ D+ Sbjct: 2 RKKVIAGNWKMNKVLSEAGEFMNSVVPKAPKGNDVEAIVCAPFPFLSK-LVEQAKGSEVKVAAQNMHFEDSGAFTGEVSPVMLKDLGVTHVVLGHSERRELFAETNELVNKKTKAAFAHDLTPIVCVGETLDQREANETMNIVGEQVKQAVAGLTNEQVAETIIAYEPVWAIGTGKTATSEQANEVCTEIRKVVAEVTSADVAEKVIIQYGGSVKPANVDELLAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBL (Triosephosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 97/231 (41.99%), Postives = 131/231 (56.71%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFL-GLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRK---WLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N + +E + + E L L G+ K + V AQN + AFTGE S E L LG+ V++GHSERR L E+N F +K+ + L V+ CVGETL +RE+G T +V+++Q + + S+SN++LAYEPVWAIGTGKVATPAQAQEVHF +RK LF + EIA + I+YGGSV N + L + D+ Sbjct: 2 RKTVIAGNWKMNLSEKEALSLAHSIKEKIPAISKGRISMIFPSTLHLAGVAKILQGTEILVGAQNVYPSGLAAFTGETSPEQLKELGVKVVMIGHSERRQFLGETNSFCNEKIHFLLKNDFIVLYCVGETLMERESGKTFEVISSQIREGLKGIHSHSFSNLILAYEPVWAIGTGKVATPAQAQEVHFFIRKEIAGLFLG-AKEIAESISILYGGSVKPDNIQTLLKEKDL 231
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBJ (Triosephosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 97/231 (41.99%), Postives = 131/231 (56.71%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFL-GLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRK---WLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N + +E + + E L L G+ K + V AQN + AFTGE S E L LG+ V++GHSERR L E+N F +K+ + L V+ CVGETL +RE+G T +V+++Q + + S+SN++LAYEPVWAIGTGKVATPAQAQEVHF +RK LF + EIA + I+YGGSV N + L + D+ Sbjct: 2 RKTVIAGNWKMNLSEKEALSLAHSIKEKIPAISKGRISMIFPSTLHLAGVAKILQGTEILVGAQNVYPSGLAAFTGETSPEQLKELGVKVVMIGHSERRQFLGETNSFCNEKIHFLLKNDFIVLYCVGETLMERESGKTFEVISSQIREGLKGIHSHSFSNLILAYEPVWAIGTGKVATPAQAQEVHFFIRKEIAGLFLG-AKEIAESISILYGGSVKPDNIQTLLKEKDL 231
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_THICR (Triosephosphate isomerase OS=Thiomicrospira crunogena (strain XCL-2) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.287e-38 Identity = 95/229 (41.48%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRP-DFHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ FV GNWK +G +K +V+ LN + ++L K+ L + + QN ++ GA+TGE SA ML ++G +VILGHSERR I E+++ + KV AL GL I CVGETLE+RE+G V++ Q A+ V ++++V+AYEPVWAIGTGK A+ QAQ+VH +R L A +P +A I YGGSV N EL +QPD+ Sbjct: 2 RQLFVAGNWKMHGDKASIKTLVTGLN-AKADSVGDVLVAVCPPAIYLDYTKNCLMAGEIALGGQNMAIEPVQGAYTGETSASMLKDVGCQYVILGHSERRAIYGETDQDIAAKVKTALDSGLTPILCVGETLEERESGQLESVISQQLDAVISEVGIDQFADVVIAYEPVWAIGTGKTASAQQAQDVHAFIRGQL-AKLNPSVAEKVIIQYGGSVKPNNASELFSQPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.287e-38 Identity = 96/224 (42.86%), Postives = 127/224 (56.70%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHV-AAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 V GNWK NG+ V ++++ L + + ++L L K + V AQN V GAFTGE SAEML ++G ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ S++ +V+AYEPVWAIGTGK ATPAQAQ VH +R + A ++A I YGGSVN AN EL QPD+ Sbjct: 6 VMGNWKLNGSRHMVNELIANLRK-ELAGVTGCAVAIAPPDIYLDLAKHAADGSHIVLGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDELIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGASAFEGVVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKVAEQVIIQYGGSVNAANAAELFTQPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSYIN (Triosephosphate isomerase OS=Psychromonas ingrahamii (strain 37) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38 Identity = 89/223 (39.91%), Postives = 119/223 (53.36%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 V GNWK NGT E V ++ + + + AQ+ GAFTGE S M+ G + ++GHSERR NE++ V K + GL + C+GETLE+RE T +VV Q KA+ D + + N V+AYEPVWAIGTGKVA+ QAQ+VH +R WL A S +AA +I+YGGSV ++ KEL AQPD+ Sbjct: 6 VMGNWKLNGTKESVSALIKGIEAAADAAKNVEVAVCPPTIFIEQVANLVANNSIELGAQDVSTNISGAFTGETSPVMVKEFGAKYSLVGHSERRQYHNETDAVVAAKFVAIQANGLVPVLCIGETLEERETDKTFNVVETQLKAVIDVSGIDALENAVIAYEPVWAIGTGKVASSEQAQDVHAHIRTWL-AEQSKVVAAKVQILYGGSVKASSAKELFAQPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38 Identity = 97/229 (42.36%), Postives = 125/229 (54.59%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFL--GLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK NG+ +++ + G + GL+ + + AQ+ + GA+TGE+S ML +VI+GHSERR E+NE + K AL+ GL I CVGETL+QREAG T VVA Q + + S + IV+AYEPVWAIGTGK ATPA AQEVH LRK L A + E A RI+YGGS+ N KEL A D+ Sbjct: 2 RRKLVAGNWKMNGSLAANTLLLTEIKSGLGNATSDVAVCVPSPYFAQCQGLLNGAA---IALGAQDVSSHEAGAYTGEVSTSMLQEFDCRYVIVGHSERRAYFAETNELIAQKTVRALNAGLTPIVCVGETLDQREAGQTDSVVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAKNA-EAAMQVRILYGGSMKPENAKELLAMSDI 226
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLAA (Triosephosphate isomerase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=tpiA PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38 Identity = 93/223 (41.70%), Postives = 119/223 (53.36%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK T E +V L G + + AQN + + GAFTGE+S MLV++G +VI+GHSERR ES+ FV K+ AL+ GL+ I CVGE+ QR+AG +V AQ +A V +N+V+AYEP+WAIGTG ATPA AQ +H +R L EIAA RI YGGSV N EL AQPD+ Sbjct: 6 IAGNWKMYKTVGEATTLVRDLLAGLGELSDREAIVCPPFTALAAVAALVADSPLGLGAQNLYPEAQGAFTGEVSPPMLVDIGCRYVIIGHSERRQYFGESDAFVNRKLRAALAHGLRPIVCVGESKPQRDAGQAEPIVTAQVRAALLEVPPDQMANVVIAYEPIWAIGTGDTATPADAQAMHAAIRATLAELYGSEIAATVRIQYGGSVKPDNIDELMAQPDI 228 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |