CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_STRPN (Triosephosphate isomerase OS=Streptococcus pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 85/232 (36.64%), Postives = 121/232 (52.16%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK F+ GNWK N PEE K V + ++ + + VAAQNC+ + GAFTGE S ++L +G +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDV Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPALDLTTVLAVAKGSNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_STRPI (Triosephosphate isomerase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 85/232 (36.64%), Postives = 121/232 (52.16%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK F+ GNWK N PEE K V + ++ + + VAAQNC+ + GAFTGE S ++L +G +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDV Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPALDLTTVLAVAKGSNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_STRP4 (Triosephosphate isomerase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 85/232 (36.64%), Postives = 121/232 (52.16%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK F+ GNWK N PEE K V + ++ + + VAAQNC+ + GAFTGE S ++L +G +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDV Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPALDLTTVLAVAKGSNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_STRP2 (Triosephosphate isomerase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 85/232 (36.64%), Postives = 121/232 (52.16%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK F+ GNWK N PEE K V + ++ + + VAAQNC+ + GAFTGE S ++L +G +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDV Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPALDLTTVLAVAKGSNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LAWIP (Triosephosphate isomerase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 87/224 (38.84%), Postives = 114/224 (50.89%), Query Frame = 3 Query: 45 KFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL---FANTSPEIAAATRIIYGGSVNGANCKEL 698 K + NWK N E K ++ L FL + +K L+ + AQN + GAFTGEIS EML ++G WV++GHSERR I+ E + K ALS G +I C+GET ++REAG V+ Q + + S S +V+AYEPVWAIGTGKVA+ H +RK L NTS I RI+YGGSVN N + Sbjct: 2 KILIAANWKMNKNRLEAKDMIEKLMSMPEGIPPQRDIVLFPPFLAIDTIKEKLKNSTIVIGAQNFYPAPSGAFTGEISLEMLKDVGCSWVLIGHSERRHIIGELPTLIEQKTKLALSYGFSIILCIGETAQEREAGLVNSVLEQQLRTSLTDIPSKAISQLVIAYEPVWAIGTGKVASQQDIITAHTLIRKILHNMIGNTSQNI----RILYGGSVNSENASSI 221
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_DEHE1 (Triosephosphate isomerase OS=Dehalococcoides ethenogenes (strain 195) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 90/229 (39.30%), Postives = 125/229 (54.59%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL---FANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ + GNWK N T E +V + + F+ L VK+ L H+ AQN + ++ GA+TGEIS ML ++ P+VI+GHSERR E+ + V K+ AL G+ I CVGE LE+ E G T ++ Q K ++ S+I++AYEP+WAIGTGK AT A+A +RK L + NT+ I T I+YGGSVN N EL Q D+ Sbjct: 2 RQIIIAGNWKMNTTLSEACTLVQGMKY-ELDQISGIQKIVCPPFISLAPVKTILDGSSIHLGAQNLFYEEKGAYTGEISPLMLQDI-CPYVIIGHSERRAYFGETGQVVNRKIKAALQAGIMPIVCVGEKLEENENGQTRQILETQMKEALAGINP-SSIIIAYEPIWAIGTGKAATAAEANNTISYIRKVLGDIWGNTASRI---TPILYGGSVNEKNTAELLCQSDI 224
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_VIBPA (Triosephosphate isomerase OS=Vibrio parahaemolyticus GN=tpiA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33 Identity = 86/230 (37.39%), Postives = 123/230 (53.48%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFH---VAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK NG+ V ++++ LN + L++ L + + + + AQN + GAFTG++S EML + G +I+GHSERR NES+EF+ K + GL + C+GE+ Q EAG T V A Q A+ D V + + ++AYEP+WAIGTGK AT AQ +H +R L A +AA I YGGSV N + +QPD+ Sbjct: 2 RRPVVMGNWKLNGSKAMVTELLTGLN-AELEGVEGVDVAVAPPALYIDLAERLIAEGGNKIILGAQNTDLNNSGAFTGDMSPEMLKDFGATHIIIGHSERREYHNESDEFIAKKFNFLKENGLTPVFCIGESEAQNEAGETEAVCARQINAVIDTYGVEALNGAIIAYEPIWAIGTGKAATAEDAQRIHASIRA-LIAAKDEAVAAQVIIQYGGSVKPENAEAYFSQPDI 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BORBZ (Triosephosphate isomerase OS=Borrelia burgdorferi (strain ZS7) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 89/229 (38.86%), Postives = 122/229 (53.28%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK F+ GNWK + T E + + F L V ++ + + AQN + GA T EIS ML+ G+ +VILGHSE RL L E++E + K+ L K +I CVGETL++R++G T++VV Q K + V S I+LAYEPVWAIGTGK AT +A+EVH +R + S + I YGGSVN N KEL +P++ Sbjct: 2 RKTFLAGNWKMHYTSAEASIVAKKIATEVKTLKDDVVIMITPPFTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLYLAETDEIINKKILAGLKHPFKYLILCVGETLDERDSGKTLEVVLNQVKKGLNCVSESDIQRIILAYEPVWAIGTGKTATKEEAEEVHKAIRLEITKLYSKSASDNIIIQYGGSVNSNNVKELMNEPNI 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BORBU (Triosephosphate isomerase OS=Borrelia burgdorferi GN=tpiA PE=3 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 89/229 (38.86%), Postives = 122/229 (53.28%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK F+ GNWK + T E + + F L V ++ + + AQN + GA T EIS ML+ G+ +VILGHSE RL L E++E + K+ L K +I CVGETL++R++G T++VV Q K + V S I+LAYEPVWAIGTGK AT +A+EVH +R + S + I YGGSVN N KEL +P++ Sbjct: 2 RKTFLAGNWKMHYTSAEASIVAKKIATEVKTLKDDVVIMITPPFTALSKVSECIKGSNILLGAQNMSYMESGARTSEISPSMLLEFGVEYVILGHSECRLYLAETDEIINKKILAGLKHPFKYLILCVGETLDERDSGKTLEVVLNQVKKGLNCVSESDIQRIILAYEPVWAIGTGKTATKEEAEEVHKAIRLEITKLYSKSASDNIIIQYGGSVNSNNVKELMNEPNI 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_GEOBB (Triosephosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33 Identity = 87/227 (38.33%), Postives = 119/227 (52.42%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK T E ++ L + L + +AAQ+ + ++ GAFTGE+S ML++ G VI+GHSERR E+ E V KV AL L I C+GETLE REAG T V+ Q K + + + ++ +++AYEPVWAIGTGKVA+ QAQE H +R + A RI+YGGSV N K L ++PD+ Sbjct: 2 RKPVIAGNWKLFKTKNEALALIEELAPLVSGVDSVEIVVAPVFTVLPTLPAALAGTGISLAAQDVFWEEEGAFTGEVSPRMLLDAGASHVIIGHSERRQYFGETEETVNKKVKAALKGALVPIVCIGETLEAREAGDTFKVLERQLKGGLEGLTGTQFAPVIVAYEPVWAIGTGKVASDDQAQEAHAFIRGVIAGLFGKSAADKVRILYGGSVKPDNVKGLMSRPDI 228 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |