CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACSK (Triosephosphate isomerase OS=Bacillus clausii (strain KSM-K16) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.185e-33 Identity = 88/227 (38.77%), Postives = 116/227 (51.10%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + L+++ + + AQ + GAFTGEIS + L ++G+ +VI+GHSERR + E++E V KV A + L I C GET E+REAG VV Q + +S V+AYEP+WAIGTGK AT A E +R+ + AN S E A A RI YGGSV N K+ AQPD+ Sbjct: 2 RKPIIAGNWKMNKTIGEAVDFVEAVKANVPAQATVDSVVCAPALFLDRLLQAVKGTELKIGAQTMHFEDNGAFTGEISPKALSDMGVHYVIIGHSERREMFAETDETVNKKVHAAFAHHLVPIMCCGETAEEREAGKMEAVVKEQVENGLAGLSEEQVKQTVIAYEPIWAIGTGKSATEKDANEACAYVRQTVAANFSEEAAEAIRIQYGGSVKPGNIKDYMAQPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRATN (Triosephosphate isomerase OS=Francisella tularensis subsp. novicida (strain U112) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 80/221 (36.20%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GNWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDV Sbjct: 7 GNWKMNGNSTSIKELCSGISQAQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLDQIQETHQFIRS-LLAKVDERLAKNIKIVYGGSLKAENAKDILSLPDV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_DESVV (Triosephosphate isomerase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 79/171 (46.20%), Postives = 110/171 (64.33%), Query Frame = 3 Query: 213 FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 F + Q+ + GA+TGEI+ ML++ G WV+ GHSERR IL E +E V K A++L GL+V+ C+GE L++REAG DV+A Q + +AD +++ ++V+AYEPVWAIGTGKVA PA+ E H +R L A + AA RI+YGGSV N EL + +V Sbjct: 61 FAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNV 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_DESVH (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 79/171 (46.20%), Postives = 110/171 (64.33%), Query Frame = 3 Query: 213 FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 F + Q+ + GA+TGEI+ ML++ G WV+ GHSERR IL E +E V K A++L GL+V+ C+GE L++REAG DV+A Q + +AD +++ ++V+AYEPVWAIGTGKVA PA+ E H +R L A + AA RI+YGGSV N EL + +V Sbjct: 61 FAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNV 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CLONN (Triosephosphate isomerase OS=Clostridium novyi (strain NT) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 89/227 (39.21%), Postives = 120/227 (52.86%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T + K+V L L +VK++ + V AQN ++ GAFTGE + ML LG+ +VILGHSERR E++ + K+ A L I C+GETLE+REA T +V+A Q K + + + V+AYEP+WAIGTGK AT QA+E +RK + E A RI YGGSV A KE A+P++ Sbjct: 2 RKAIIAGNWKMNNTISQGLKLVEELKPLVADANCDVVVCPPTLALD-AVVKATEGTNIKVGAQNMHFEESGAFTGETAPAMLEELGVKYVILGHSERRQYFGENDADLNKKMKKAFEHNLTPILCIGETLEEREADVTEEVLAKQIKLDLAGLTEAQIAETVIAYEPIWAIGTGKTATSDQAEETIAFVRKTVAGMFGAEAAEKMRIQYGGSVKPATIKEQMAKPNI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS3_RHIEC (Triosephosphate isomerase (Fragment) OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 252 GAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GA+TGE+SAE+L + I +V++GHSERR ES + K AL+ GLKVI CVGE+LEQRE+G VV Q +A V++ W +IV+AYEP+WAIGTGK A+P AQ +H ++R+ L TS A I+YGGSV N ELAA PD+ Sbjct: 68 GAYTGEVSAELLKDSQIEYVLIGHSERREYFAESAAILNAKAQNALNAGLKVIYCVGESLEQRESGQAEVVVLQQICDLASVVTAEQWPHIVIAYEPIWAIGTGKTASPEDAQTMHAKIREGLTQITSH--GANMAILYGGSVKAENAVELAACPDI 222
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS1_LISMF (Triosephosphate isomerase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tpiA1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 85/227 (37.44%), Postives = 116/227 (51.10%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNI--VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T + + + LV+ + + VAAQNC+ + GAFTGEIS L +LG+ +VI+GHSERR +E++E + K G+ I C GETL+QREAG T V Q +A ++ I V+AYEP+WAIGTGK +T A A E +R + S + A A RI YGGSV N + A+ D+ Sbjct: 2 RKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS1_LISIN (Triosephosphate isomerase 1 OS=Listeria innocua GN=tpiA1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 85/227 (37.44%), Postives = 116/227 (51.10%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNI--VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T + + + LV+ + + VAAQNC+ + GAFTGEIS L +LG+ +VI+GHSERR +E++E + K G+ I C GETL+QREAG T V Q +A ++ I V+AYEP+WAIGTGK +T A A E +R + S + A A RI YGGSV N + A+ D+ Sbjct: 2 RKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_THET2 (Triosephosphate isomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32 Identity = 87/228 (38.16%), Postives = 117/228 (51.32%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK + TP E + + L + F L + K L AQ+ K GA+TGE+SA ML +LG + I+GHSERR E++ V +K L +G+ I CVGE LE RE G + Q + + V +V+AYEPVWAIGTGK ATP A+ +H E+RK L A+ RI+YGGSVN N +L + P+V Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELK--RLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQEIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNV 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CLOAB (Triosephosphate isomerase OS=Clostridium acetobutylicum GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32 Identity = 87/223 (39.01%), Postives = 118/223 (52.91%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK N T E K++ L L +V ++ + VAAQN ++ GAFTGEIS + L LG+ +VILGHSERR NE++ + KV A + + I C GETLE+REA T +V Q K +S+ + +V+AYEP+WAIGTGK AT QA E +RK + E+A RI YGGSV K A+P++ Sbjct: 6 IAGNWKMNNTISESLKLIEELKPLVKDAKAEVVVAPTAVSLET-VVNATKGSNIKVAAQNAHFEESGAFTGEISLKALEELGVSYVILGHSERRQYFNETDCALNKKVKAAFAHNITPILCCGETLEEREANVTNEVTGKQIKLDLAGLSAEQAAKVVIAYEPIWAIGTGKTATDEQANETIGAIRKTVEVMFGKEVAEKVRIQYGGSVKPNTIKAQMAKPEI 227 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |