CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCV (Triosephosphate isomerase OS=Chlamydophila caviae GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32 Identity = 86/230 (37.39%), Postives = 119/230 (51.74%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRP---DFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK +V GNWK + T +E K +S+ F L S++ + AQN GAFTGE+S ML + +V+LGHSE R I +E + + KV A G+ + C+GETLE RE G+T +V++ Q ++ + +++AYEPVWAIGTGKVA+ A QEVH R+ L S E + I+YGGSV N + A PDV Sbjct: 1 MERKSYVFGNWKMHKTAKEAKDFLSIFCPFVKEISPASLVGIAPAFTTLSACCESIKEMDSSIWLGAQNVHQDSSGAFTGEVSLPMLQEFHVNFVLLGHSECRHIFHEEDATIALKVGAAARSGVVPVLCIGETLEARENGTTKEVLSNQLMLGLAQLPETAPVIIAYEPVWAIGTGKVASTADVQEVHAFCREVLSRIFSKEKSEIISILYGGSVKADNAEGFARCPDV 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_TREDE (Triosephosphate isomerase OS=Treponema denticola GN=tpiA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 87/228 (38.16%), Postives = 122/228 (53.51%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 +KF++ NWK N E K++ + + G F L V S L+ + + AQN +++ GA TGE+S L+++G+ VILGHSERR I E+++ + KV AL GL+VI CVGE LE+REAG V Q K VS+ + +AYEPVWAIGTGK A+P A +H +RK L A + A I YGGS+ N L + ++ Sbjct: 2 KKFYIAANWKMNMNRAEAKQLATEMKAG--LKDGKNKYMIAPSFTLLQDVASVLKGSNILLGAQNMGLEEKGAHTGEVSVLQLLDVGVQAVILGHSERRHIYKETDDLINKKVKLALKHGLEVILCVGELLEEREAGHAEAVCERQIKKGLAEVSAKDLDKVTIAYEPVWAIGTGKNASPEDADAIHSSIRKTLAALYGEKAAKNMIIQYGGSMKPENAAGLLKKHNI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRATT (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis GN=tpiA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 80/221 (36.20%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GNWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDV Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGSLKAENAKDILSLPDV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRAT1 (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 80/221 (36.20%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GNWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDV Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGSLKAENAKDILSLPDV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PEDPA (Triosephosphate isomerase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 83/223 (37.22%), Postives = 116/223 (52.02%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK N P+E ++ + + LV S AA+N + + GAFTGE S + L +G+ +V++GHSERR E++E + K + + I C GETLEQREAG T + VA Q T A+ D + + V+AYEP+WAIGTGK A+ QAQEV +R+ + +A RI YGGSV AN EL + D+ Sbjct: 6 IAGNWKMNKNPQETQEFLDAIKGKLPDASVVESVIAAPAIDLSTLVAFSKDEQLKTAAENSYFEDEGAFTGETSPKALNEMGVNYVVIGHSERRQYFGETDEDINKKAKAIFNNNMTPIICCGETLEQREAGETNEWVAGQITNALKDLTAEQVAASVIAYEPIWAIGTGKTASSDQAQEVCHVIRETVAKLYDQTVADKVRIQYGGSVKPANIAELMGKEDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTU (Triosephosphate isomerase OS=Mycobacterium tuberculosis GN=tpiA PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 89/236 (37.71%), Postives = 122/236 (51.69%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L LG +V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGSVN N ++ AQ DV Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTA (Triosephosphate isomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 89/236 (37.71%), Postives = 122/236 (51.69%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L LG +V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGSVN N ++ AQ DV Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHY (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 87/228 (38.16%), Postives = 120/228 (52.63%), Query Frame = 3 Query: 45 KFFVGGNWKCNGTPEEVKKIVSVLN----EGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 K + GNWK N T E + + + E F+ L L+ SL +AAQN GAFTGEIS +ML +LG +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ N T +IYGGSVN N EL +Q + Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKENFGKN--------TMVIYGGSVNSKNINELVSQKSI 220
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHJ (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 87/228 (38.16%), Postives = 120/228 (52.63%), Query Frame = 3 Query: 45 KFFVGGNWKCNGTPEEVKKIVSVLN----EGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 K + GNWK N T E + + + E F+ L L+ SL +AAQN GAFTGEIS +ML +LG +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ N T +IYGGSVN N EL +Q + Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKENFGKN--------TMVIYGGSVNSKNINELVSQKSI 220
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH7 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 86/228 (37.72%), Postives = 119/228 (52.19%), Query Frame = 3 Query: 45 KFFVGGNWKCNGTPEEVKKIVSVLN----EGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 K + GNWK N T E + + + E F+ L L+ SL +AAQN GAFTGEIS +ML +LG +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGSVN N EL +Q + Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGMIKE--------NFGKDTTVIYGGSVNSKNINELVSQKSI 220 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |