CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH2 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 232) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 87/228 (38.16%), Postives = 120/228 (52.63%), Query Frame = 3 Query: 45 KFFVGGNWKCNGTPEEVKKIVSVLN----EGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 K + GNWK N T E + + + E F+ L L+ SL +AAQN GAFTGEIS +ML +LG +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ N T +IYGGSVN N EL +Q + Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKENFGKN--------TMVIYGGSVNSKNINELVSQKSI 220
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBO (Triosephosphate isomerase OS=Mycobacterium bovis GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 89/236 (37.71%), Postives = 122/236 (51.69%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L LG +V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGSVN N ++ AQ DV Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRATO (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 80/221 (36.20%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GNWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDV Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGSLKAENAKDILSLPDV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRATH (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tpiA PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 80/221 (36.20%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GNWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDV Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGSLKAENAKDILSLPDV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRATF (Triosephosphate isomerase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tpiA PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 80/221 (36.20%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 GNWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDV Sbjct: 7 GNWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRKSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDERLAKNIKIVYGGSLKAENAKDILSLPDV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_DESDG (Triosephosphate isomerase OS=Desulfovibrio desulfuricans (strain G20) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 85/229 (37.12%), Postives = 114/229 (49.78%), Query Frame = 3 Query: 45 KFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR--PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW---SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 K + NWK TP+E L + F+ L V + F+ AQN + GA+TGEIS M+V+ G W + GHSERR +L ES+ FVG K A+ L +GL V+ C+GETLE+RE G V+ Q V + + +AYEPVWAIGTGKVA A+ H +R L P A + RI+YGGSV N + + +V Sbjct: 2 KKLMAANWKMYKTPQEAALTAGELVKAVGTVPDDREVLVFPPFVGLAQVAQAFSGVAGFYCGAQNVYPADEGAYTGEISPGMIVSTGAAWALTGHSERRSVLGESSAFVGQKTAFCLEKGLNVVLCIGETLEEREGGQLEKVLRGQLSEGLSGVPAGIAPERLAIAYEPVWAIGTGKVAGTAEIAATHAVVRGML-RELLPAAADSMRILYGGSVKPDNAAAIISLDNV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BORRA (Triosephosphate isomerase OS=Borrelia recurrentis (strain A1) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 91/229 (39.74%), Postives = 120/229 (52.40%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLV-KSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK F+ GNWK + T E + + +G F L V + + + + AQN + GA T EI+ ML+ G+ +VILGHSE R L E++E + KV L K +I CVGETLE+RE G T+DVV Q + V S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGSVN N + L + D+ Sbjct: 2 RKVFLAGNWKMHYTSVEAADVAKQIVDGVYNINNNVVVMVTPTFTSLCKVCRVTKGTNVLLGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGSVNVDNVEGLMGENDI 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BORDL (Triosephosphate isomerase OS=Borrelia duttonii (strain Ly) GN=tpiA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 91/229 (39.74%), Postives = 120/229 (52.40%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLV-KSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK F+ GNWK + T E + + +G F L V + + + + AQN + GA T EI+ ML+ G+ +VILGHSE R L E++E + KV L K +I CVGETLE+RE G T+DVV Q + V S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGSVN N + L + D+ Sbjct: 2 RKVFLAGNWKMHYTSVEAADVAKQIVDGVYNINNNVVVMVTPTFTSLCKVCRVTKGTNVLLGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGSVNVDNVEGLMGENDI 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS1_RHILO (Triosephosphate isomerase 1 OS=Rhizobium loti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 87/221 (39.37%), Postives = 113/221 (51.13%), Query Frame = 3 Query: 39 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKEL 698 G + V GNWK NGT + ++ + N L L R H ++C K+ GA+TG ISAEML + G VI+GHSE R E + V K A A GL I C+GET +QREAG+T++V++ Q ++ SN V+AYEPVWAIGTG T A E H +R+ L AA TRI+YGGSV +N EL Sbjct: 4 GIRPLVAGNWKMNGTSASLNELRMIGNGFMSGLDAETEALVCVPATLLSHAAEILSRTPVHAGGEDCHTKESGAYTGCISAEMLKDAGASHVIVGHSECREQRGEDDATVQAKAAAAWRAGLVAIICIGETQQQREAGATLEVLSRQVAGSVPPSATPSNTVIAYEPVWAIGTGLTPTAADVAEAHAHIRERLSEKLGAS-AAKTRILYGGSVKPSNAVEL 223
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_VIBCH (Triosephosphate isomerase OS=Vibrio cholerae GN=tpiA PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32 Identity = 86/230 (37.39%), Postives = 119/230 (51.74%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFH---VAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK NG+ V +++ LN + ++L L + ++ + + AQN GA+TG++S ML + G +I+GHSERR ES+EFV K A+ GL + C+GET Q EAG T V A Q A+ D V + + ++AYEP+WAIGTGK AT AQ +H +R L A +A I YGGSV N AQPD+ Sbjct: 2 RRPVVMGNWKLNGSKAMVTDLLNGLN-AELEGVEGVDVVVAPPAMYLDLAERLIKEGGNKLILGAQNTDTHNSGAYTGDMSPAMLKDFGASHIIIGHSERRDYHKESDEFVAKKFAFLKENGLTPVFCIGETEAQNEAGETEAVCARQINAVIDAYGVEALNGAIIAYEPIWAIGTGKAATADDAQRIHASIRA-LIAAKDAAVAEQVIIQYGGSVKPENAASYFAQPDI 229 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |