CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPN (Triosephosphate isomerase OS=Chlamydia pneumoniae GN=tpiA PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 83/230 (36.09%), Postives = 115/230 (50.00%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD---FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M R+ +V GNWK + T +E K+ V L F L + + + AQN + GAFTGEIS ML +G+ +V++GHSERR I ES+ F+ KV GL + CVGE+LE RE G V+ Q +++ + S ++AYEPVWAIGTGKVA + Q++H R+ + S A I+YGGSV N + DV Sbjct: 1 MTRQSYVLGNWKMHKTIQEAKEYVQTLASLLQGEPLSCTIGIASPFTSLRAIHEMINTTGAFLWLGAQNVHPELSGAFTGEISLPMLKEVGVEFVLVGHSERRHIFGESDAFIASKVKSVAQAGLVPVLCVGESLEVREEGKAHQVIKKQLLLGLEQMDNGSEFLIAYEPVWAIGTGKVAEASDVQDIHMFCREVVAERFSEATAEEISILYGGSVKVDNAQRFGQCSDV 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_RALEH (Triosephosphate isomerase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tpiA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 94/229 (41.05%), Postives = 122/229 (53.28%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVA--AQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +G+ + L EG F +L ++ L VA AQ+ + GAFTGE+SA M+ G +V++GHSERR E+++ V K AL G+ + CVGETL QREAG T VV Q +A+ D V S +VLAYEPVWAIGTGK AT QAQ VH LR + A + +A I+YGGSV N EL + D+ Sbjct: 2 RQKLVIGNWKMHGS----LAANAALLEGIKAGAAKATLAVCAPFPYLAQCQALLNGS-QVAWGAQDVSAEARGAFTGEVSASMVGEFGCTYVLVGHSERRTYHGETDQTVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLDALTVEQLSRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAARDA-GVAERMAILYGGSVKPDNAAELFSMTDI 224
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 85/223 (38.12%), Postives = 114/223 (51.12%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK NG + ++ L + + S L V AQ+C + + GA TG++SAEMLV G WVILGHSERR E +E V +KV A GL I CVGET ++R +G ++V Q K ++ D ++ SN V+AYEPVWAIGTG+ AT +H +R+ L E RI+YGGSV N L P+V Sbjct: 5 IAGNWKMNGLRSTSESLLQALRDAAPHALRNCDMLICPPATLIAQAASVLAGSGIEVGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAARQFGLTPIVCVGETEDERASGRETEIVGWQIKGSLPDGFAADSNGVIAYEPVWAIGTGRTATVEDVAMMHAFIREELVRQFG-EAGRGVRILYGGSVKPENAASLLRVPEV 226
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BIFLO (Triosephosphate isomerase OS=Bifidobacterium longum GN=tpiA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 87/230 (37.83%), Postives = 126/230 (54.78%), Query Frame = 3 Query: 54 VGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVA--AQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 V GNWK N E V+K+V +L + F L V+ + D HVA AQ+ V GAFTG++SA+M+ +LG +VI+GHSERR E + + D+V L+ G++ I CVGE+ E+R G +D Q + + ++ + +++AYEPVWAIGTG VATP AQ+ +R L +++ + RI+YGGSV N EL +QPDV Sbjct: 9 VAGNWKMNFDHLEATYFVQKLVWLLRDAHFDFKRCEVALFPS-FTSLRSVQVLVEADKLHVAYGAQSVSVTTQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDANIVDQVRAVLAAGMQPILCVGESFEERRQGIELDFAVGQVRDVTRDLNEEQAAKLIVAYEPVWAIGTGMVATPQSAQDAANAIRNDLKTTFGTKVSDSVRILYGGSVTSKNAAELISQPDV 237
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BIFLD (Triosephosphate isomerase OS=Bifidobacterium longum (strain DJO10A) GN=tpiA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 87/230 (37.83%), Postives = 126/230 (54.78%), Query Frame = 3 Query: 54 VGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVA--AQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 V GNWK N E V+K+V +L + F L V+ + D HVA AQ+ V GAFTG++SA+M+ +LG +VI+GHSERR E + + D+V L+ G++ I CVGE+ E+R G +D Q + + ++ + +++AYEPVWAIGTG VATP AQ+ +R L +++ + RI+YGGSV N EL +QPDV Sbjct: 9 VAGNWKMNFDHLEATYFVQKLVWLLRDAHFDFKRCEVALFPS-FTSLRSVQVLVEADKLHVAYGAQSVSVTTQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDANIVDQVRAVLAAGMQPILCVGESFEERRQGIELDFAVGQVRDVTRDLNEEQAAKLIVAYEPVWAIGTGMVATPQSAQDAANAIRNDLKTTFGTKVSDSVRILYGGSVTSKNAAELISQPDV 237
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_SYMTH (Triosephosphate isomerase OS=Symbiobacterium thermophilum GN=tpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31 Identity = 80/168 (47.62%), Postives = 100/168 (59.52%), Query Frame = 3 Query: 219 VAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + AQN K GAFTGE+S MLV+ G +VILGHSERR + ES+E VG KV AL GL I C+GETLE+++AG V Q A + ++ +N+V+AYEPVWAIGTG+ P AQ +R + PE AA RI YGGSV N AQPD+ Sbjct: 61 LGAQNMSDKPSGAFTGEVSGAMLVDAGCRYVILGHSERRRLFGESDEVVGAKVRAALQHGLIPILCIGETLEEQQAGEADAVNRRQLLAGLEGLTPEQVANLVIAYEPVWAIGTGRNCDPGDAQARIAAVRAVVAEAFGPEAAARVRIQYGGSVKPENMAAYMAQPDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCUA (Triosephosphate isomerase OS=Mycobacterium ulcerans (strain Agy99) GN=tpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31 Identity = 90/233 (38.63%), Postives = 118/233 (50.64%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + Q+ GA+TG+IS L LG +V++GHSERR NE + V K A AL L I C+GE L+ REAG+ + Q + +S+ S +V+AYEPVWAIGTG+VA A AQEV +R L + SP+IA A R++YGGSVN N EL AQ DV Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYYDKVDVTVIPPFTDLRSVQTLVDGDKLRLTYGGQDLSQHDSGAYTGDISGAFLAKLGCSFVVVGHSERRTYHNEDDALVAAKAAAALKHDLTPIVCIGEHLDVREAGNHVAHNVEQLRGSLSGLSAEQISKVVIAYEPVWAIGTGRVAGAADAQEVCAAIRSELGSLASPQIADAVRVLYGGSVNAKNIGELIAQADV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCMM (Triosephosphate isomerase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31 Identity = 90/233 (38.63%), Postives = 118/233 (50.64%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + Q+ GA+TG+IS L LG +V++GHSERR NE + V K A AL L I C+GE L+ REAG+ + Q + +S+ S +V+AYEPVWAIGTG+VA A AQEV +R L + SP+IA A R++YGGSVN N EL AQ DV Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYYDKVDVTVIPPFTDLRSVQTLVDGDKLRLTYGGQDLSQHDSGAYTGDISGAFLAKLGCSFVVVGHSERRTYHNEDDALVAAKAAAALKHDLTPIVCIGEHLDVREAGNHVAHNVEQLRGSLSGLSAEQISKVVIAYEPVWAIGTGRVAGAADAQEVCAAIRSELGSLASPQIADAVRVLYGGSVNAKNIGELIAQADV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31 Identity = 83/227 (36.56%), Postives = 117/227 (51.54%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK + T +E + V + LV+++ + + AQN + GAFTGEIS L +LG+ +VI+GHSERR + E++E V KV A GL I C GETLE+RE+ T +VV Q + + ++ +V+AYEP+WAIGTGK +T A V +R+ + S E A A RI YGGSV N A+ + Sbjct: 2 RKPIIAGNWKMHKTLKEALQFVEEVKHEVPSNEQVDAVVCAPALFLAHLVEATKGTNVKIGAQNMHFEDQGAFTGEISPVALKDLGVEYVIIGHSERREMFAETDETVNKKVLAAFKHGLVPIVCCGETLEERESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQVIANKFSQEAANAVRIQYGGSVKPENIAAFLAEEHI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_ACIB3 (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AB307-0294) GN=tpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31 Identity = 89/232 (38.36%), Postives = 127/232 (54.74%), Query Frame = 3 Query: 51 FVGGNWKCNGTPEEVKKIVS----VLNEGQXXXXXXXXXXXXXXFLFLGL---VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 +V GNWK N +++ +L + Q + ++ + R + VA V GA+TGE+SAE+L + I +V++GHSERR I ++ E + K+ AL+ G+ VI CVGE+LEQRE G VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L TS + I+YGGSV N ELAA PD+ Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLTS--AGSNIAILYGGSVKAENAVELAACPDI 238 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |