CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_SILST (Triosephosphate isomerase OS=Silicibacter sp. (strain TM1040) GN=tpiA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.524e-31 Identity = 90/225 (40.00%), Postives = 123/225 (54.67%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATR---IIYGGSVNGANCKEL 698 M RK GNWK NGT E + ++ + L +G + ++ D + Q+C K GA TG++SA+ML + G +VI+GHSERR E + V K A + GL + C+GETLE+REAG+T++VV AQ ++ D V++ N V+AYEPVWAIGTGKV T Q EVH LR L A AA + ++YGGSV N E+ Sbjct: 1 MARKL-AAGNWKMNGTGEHLAELEN-LAQGDLPEGVDVLICPPATLISRAADRAG---DIAIGGQDCHAKTSGAHTGDLSADMLRDAGATYVIIGHSERRADHGEGDADVRAKTEAAQAAGLVAVVCIGETLEEREAGTTLEVVGAQLAGSLPDGVTA-ENTVVAYEPVWAIGTGKVPTLDQIAEVHDALRADLVA----RFGAAGKDLPLLYGGSVKPGNAAEI 215
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPU (Triosephosphate isomerase OS=Mycoplasma pulmonis GN=tpiA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.990e-31 Identity = 86/231 (37.23%), Postives = 125/231 (54.11%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXX----FLFLGLVKSSL--RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 +K + GNWK N T +E + ++ + F + L L + + ++ AQN + GAFTGEISA+ML ++ +VI+GHSERR E+N+ V K A+ GL I CVGE+LE+ EAG T V+ Q K + + S IV+AYEP+WAIGTGKVAT AQ++ K++ + TS ++ I YGGSV+ +N + L Q D+ Sbjct: 2 KKLLIIGNWKMNKTYDEARDFINAFSNAYALNGAKISENIEYGIAPSFTNMSLFNKELLEKTNINLVAQNINENRSGAFTGEISAQMLKSINAKYVIVGHSERRQNYRETNKIVNQKAKAAIENGLIPIICVGESLEEYEAGKTKAVIKKQIKQSLEAL-DLSKIVVAYEPIWAIGTGKVATAEVAQQI----CKFIRSITSKDLI----IQYGGSVSPSNIENLMKQEDI 223
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.990e-31 Identity = 78/220 (35.45%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 63 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 NWK NG +K++ S +++ Q +++ V S L V QN GA+TGEISA ML ++G ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A ++A +I+YGGS+ N K++ + P+V Sbjct: 8 NWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSS-VYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDEKLAKNIKIVYGGSLKAENAKDILSLPNV 225
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.990e-31 Identity = 82/222 (36.94%), Postives = 112/222 (50.45%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLV-KSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK NG + ++L L G K+ V AQ+C K GA TG++SAEML + G +I+GHSERR ES+ V K GL I CVGET +QR+AG T+D++ Q + S+ +N+ +AYEPVWAIGTG T +++H +R L + E A RI+YGGSV +N EL A +V Sbjct: 9 IAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_XANP2 (Triosephosphate isomerase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 87/227 (38.33%), Postives = 113/227 (49.78%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLN--EGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ + GNWK NG + +I ++ +G L + + + QNC GA TG ISAEML + G+ VI+GHSERR L+ES+ V KV A GL I CVGET E+R+AG + VV Q + SN+V+AYEPVWAIGTG+ TP +H +R L + E A RI+YGGSV N L A DV Sbjct: 5 RRVLIAGNWKMNGLKSSLAEIEALAAGYDGDLKAKLDLLVCPPATLL-ISAAERLAGSGVQLGGQNCHPAPAGAHTGGISAEMLKDAGVTSVIVGHSERRTNLSESDAVVMAKVKAAWCFGLLPIVCVGETAEERDAGEAVGVVTRQVHQSLPEGCTASNLVIAYEPVWAIGTGRTPTPEDVANIHGTIRSVLRSQFGAE-ADGIRILYGGSVKPDNAATLMAVADV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBM (Triosephosphate isomerase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 85/228 (37.28%), Postives = 118/228 (51.75%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R + GNWK N T +E ++V L ++ L V ++ + V AQN ++ GA+TGEIS +ML LG+ +VI+GHSERR NE++E V KV A L I C GE+LEQRE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + + ++A+ RI YGGSV K A+ ++ Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKP--LVKDAKCDVVVCPTYVCLPAVLEEVKGSNIKVGAQNMHFEESGAYTGEISPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEQREGNVTEKVLEGQIKVDLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKSMYGEDVASKVRIQYGGSVKPGTIKAQMAKEEI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLAB (Triosephosphate isomerase OS=Chlamydophila abortus GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 87/231 (37.66%), Postives = 120/231 (51.95%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFH----VAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK ++ GNWK + T +E K +SV F L S++ FH + AQN GAFTGEIS ML + +V+LGHSE R I +E + + KV A +G+ + C+GETLE RE G+T +++ Q ++ +++++AYEPVWAIGTGKVA+ QE H R+ L S E A I+YGGSV N + A PDV Sbjct: 1 MERKRYIFGNWKMHKTAKEAKDYLSVFCPLLEEVAPVSCVGITPAFTALHACCESIK-FFHSPLWLGAQNVHQDTSGAFTGEISLPMLKEFDVNFVLLGHSECRHIFHEEDTTIALKVGAAAREGIIPVLCIGETLEVREKGATEAMLSNQLMLGLAQLPETASVIIAYEPVWAIGTGKVASAVDVQEAHAFCREVLANIFSKEKAEEISILYGGSVKADNAEGFARCPDV 230
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCVP (Triosephosphate isomerase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.394e-31 Identity = 88/233 (37.77%), Postives = 116/233 (49.79%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L LG + ++GHSERR NE + V K A A GL I C+GE L+ REAG+ ++ Q + +S+ V+AYEPVWAIGTG+VA+ A AQEV +R L SPE+AA R++YGGSVN N E+ Q DV Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLTYGAQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHNEDDALVAAKAAAAFKHGLTPIICIGEHLDVREAGNHVEYNVNQLRGSLAGLSAEQIGQAVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASPELAAGVRVLYGGSVNAKNVGEIVGQADV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPA (Triosephosphate isomerase OS=Mycobacterium paratuberculosis GN=tpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.394e-31 Identity = 88/233 (37.77%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L LG +V++GHSERR NE + V K A AL L I C+GE LE REAG+ + Q + +S+ +V+AYEPVWAIGTG+VA+ + AQEV +RK L + S +IA + R++YGGSVN N EL AQ D+ Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFALPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLSYGAQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHNEDDALVAAKAATALKHELTPIICIGEHLEVREAGNHVIHCEEQLRGSLAGLSAEQIGKVVIAYEPVWAIGTGRVASASDAQEVCAAIRKELASLASAQIADSVRVLYGGSVNAKNVGELIAQDDI 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA1 (Triosephosphate isomerase OS=Mycobacterium avium (strain 104) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.394e-31 Identity = 88/233 (37.77%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L LG +V++GHSERR NE + V K A AL L I C+GE LE REAG+ + Q + +S+ +V+AYEPVWAIGTG+VA+ + AQEV +RK L + S +IA + R++YGGSVN N EL AQ D+ Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFALPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLSYGAQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHNEDDALVAAKAAAALKHELTPIICIGEHLEVREAGNHVIHCEEQLRGSLAGLSAEQIGKVVIAYEPVWAIGTGRVASASDAQEVCAAIRKELASLASAQIADSVRVLYGGSVNAKNVGELIAQDDI 233 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |